Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1973032	1973107	76	3 [1]	[1] 2	flhD/uspC	flagellar transcriptional regulator FlhD/universal stress protein UspC

TCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGG  >  NZ_CP009273/1972909‑1973047                                                                                                                           |                 tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGATAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg  <  2:241943/139‑1 (MQ=255)                                                                                     aTCAACTTAATGTTAATGAAATGTTTTACATATATTAAc                  <  1:54757/39‑1 (MQ=255)                                                                                     aTCAACTTAATGTTAATGAAATGTTTTACATATATTAAc                  >  2:54757/1‑39 (MQ=255)                                                                                                                           |                 TCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGG  >  NZ_CP009273/1972909‑1973047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑