| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,438,026 | T→C | K69E (AAA→GAA) | epmC ← | elongation factor P hydroxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,438,026 | 0 | T | C | 100.0% | 60.0 / NA | 18 | K69E (AAA→GAA) | epmC | elongation factor P hydroxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/10); total (8/10) | |||||||||||
TATCCCGCCGCCACACAGAACAACCAGTCGAGCGCCTGCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTTCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTTCGTCGTCGCCTTTAATCAGACG > NZ_CP009273/2437890‑2438158 | tatCCCGCCGCCACACAGAACAACCAGTCGAGCGCCTGCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTccc < 1:312228/139‑1 (MQ=255) tCCCGCCGCCACACTGAACAACCAGTCGAGCGCCTGCGGCTTCACTTCAACATCTTCAAACGGGCTTTGCGTTTGGGCACCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTcccc < 1:128779/138‑1 (MQ=255) tCCCGCCGCCACACAGAACAACCAGTCGAGCGCCTGCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTcccc < 2:115172/138‑1 (MQ=255) cacacaGAACAACCAGTCGAGCGCCTGCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATacac < 2:325726/139‑1 (MQ=255) aGCGCCTGCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGaa > 2:189788/1‑139 (MQ=255) gCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCt > 2:161066/1‑139 (MQ=255) cGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTgcgc < 1:71244/137‑1 (MQ=255) aaCATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGcc < 2:304437/138‑1 (MQ=255) gCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGAtt > 2:361928/1‑139 (MQ=255) gCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGAtt > 1:296984/1‑139 (MQ=255) cTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGcc < 1:197043/122‑1 (MQ=255) cTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGcc > 2:197043/1‑122 (MQ=255) cgcgTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTc > 1:27943/1‑139 (MQ=255) cgcgTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTc > 2:181055/1‑139 (MQ=255) gggCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATcagcag < 1:161066/139‑1 (MQ=255) cGAAATCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTtc > 1:362046/1‑139 (MQ=255) tCAACCAGCTCACGGCGCGCTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTtcgtcgt < 1:361928/139‑1 (MQ=255) cgcgcTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTTCGTCGTCGCCTTTAATCAGAc < 2:296984/139‑1 (MQ=255) cgcgcTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTTCGTCGTCGCCTTTAATCAGAc < 1:192873/139‑1 (MQ=255) gcgcTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTTCGTCGTCGCCTTTAATCAGACg < 1:287439/139‑1 (MQ=255) gcgcTTCCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTTCGTCGTCGCCTTTAATCAGACg < 1:243294/139‑1 (MQ=255) | TATCCCGCCGCCACACAGAACAACCAGTCGAGCGCCTGCGGCTTCACTTCAACATCTTCAAACTGGCTTTGCGTTTGGGCATCGCGTCCGTCCGGGCAATACCAGTAGCCGAAATCAACCAGCTCACGGCGCGCTTTCCCGGCAATACACCAGTGCGAAATCTCATGAATTGCGCTGGCATAAAAGCCATGAGCAAAGACGATTCGGTTATACGGTACTTCCGCATCAGCAGGAAGATAGATCGGTTCGTCGTCGCCTTTAATCAGACG > NZ_CP009273/2437890‑2438158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |