Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 2,684,806 | T→C | intergenic (‑349/+209) | qseE ← / ← purL | two component system sensor histidine kinase QseE/GlrK/phosphoribosylformylglycinamidine synthase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,684,806 | 0 | T | C | 100.0% | 43.5 / NA | 13 | intergenic (‑349/+209) | qseE/purL | two component system sensor histidine kinase QseE/GlrK/phosphoribosylformylglycinamidine synthase |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/5); total (8/5) |
TGAGCCACTGGTTACTATTATGCAGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAATCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCACCCATTGTCGTGATTTACAGACACAAAAA > NZ_CP009273/2684691‑2684935 | tGAGCCACTGGTTACTATTATGCAGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTaaaaa > 2:423600/1‑137 (MQ=255) aGCCACTGGTTACTATTATGCAGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAgaga < 1:139248/139‑1 (MQ=255) aGCCACTGGTTACTATTATGCAGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAgaga < 2:234411/139‑1 (MQ=255) tGCAGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACtta > 2:233207/1‑139 (MQ=255) aGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACttat > 2:301787/1‑137 (MQ=255) tAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACttat > 2:313621/1‑135 (MQ=255) ccAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATAtt > 1:299096/1‑138 (MQ=255) aGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCaa < 1:233207/139‑1 (MQ=255) tttGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAg > 1:18670/1‑139 (MQ=255) ggTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAgtgt > 2:113361/1‑139 (MQ=255) tctcCTCCGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCACCCATTGTCGTGa < 1:113361/138‑1 (MQ=255) ctccGCTGTTTGAATGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCACCCATTGTCGTGATTTa > 1:1113/1‑138 (MQ=255) aaTGTAAACCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCACCCATTGTCGTGATTTACAGACACaaaaa < 2:255906/138‑1 (MQ=255) | TGAGCCACTGGTTACTATTATGCAGTAACTGTGCCAATAAAGAAAATAGTTTGGTAACGTACTGATTATACGTTGCTTTGAGGGGTTTATGTCTCCTCCGCTGTTTGAATGTAAATCAGCCACTGTGTCGCTAAAAAGAGACAACTTAAGATAAACTTATTAGATAATATTAAAATCAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCACCCATTGTCGTGATTTACAGACACAAAAA > NZ_CP009273/2684691‑2684935 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |