| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,036,314 | A→G | F65S (TTC→TCC) | yqfA ← | hemolysin III family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,036,314 | 0 | A | G | 100.0% | 51.3 / NA | 17 | F65S (TTC→TCC) | yqfA | hemolysin III family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (7/10); total (7/10) | |||||||||||
TCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGT > NZ_CP009273/3036185‑3036440 | tCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAACGGTCAAATTTGTTCAGCCACATTTTTGCCCGTTGATGATGAATGGCGTGATAGAGCGTCGAAACGGGGGACAGCAGGa > 1:413595/1‑139 (MQ=255) aGCCCCACCAGCAAAAACGGCGTGTAGGATCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCa > 1:348661/1‑139 (MQ=255) caccaGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTg < 2:259020/139‑1 (MQ=255) ggTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCt < 2:314036/139‑1 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCAtt > 2:320936/1‑134 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCa < 2:171810/139‑1 (MQ=255) cAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAAcc < 2:413595/136‑1 (MQ=255) cAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCa < 2:36525/137‑1 (MQ=255) gatgaGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGa < 1:238436/138‑1 (MQ=255) aGGAATGGCGTGATAGAGCTTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCa < 2:348661/139‑1 (MQ=255) aGGAATGGCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCa < 1:282639/139‑1 (MQ=255) gCGTGATAGAGCGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACAcc > 1:64254/1‑138 (MQ=255) cGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATc > 1:69787/1‑81 (MQ=255) cGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATc < 2:69787/81‑1 (MQ=255) cGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAAcc < 2:147305/94‑1 (MQ=255) cGTCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAAcc > 1:147305/1‑94 (MQ=255) tCGAAGCGAGGGACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGt > 2:203068/1‑138 (MQ=255) | TCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGT > NZ_CP009273/3036185‑3036440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |