| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 757,924 | T→C | L316P (CTG→CCG) | odhB → | 2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 757,924 | 0 | T | C | 100.0% | 69.8 / NA | 21 | L316P (CTG→CCG) | odhB | 2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/10); total (11/10) | |||||||||||
TGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTC > NZ_CP009273/757789‑758058 | tGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGAc < 1:224696/139‑1 (MQ=255) cgccgcGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAAc < 2:241093/137‑1 (MQ=255) cgcgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtcac > 2:133245/1‑139 (MQ=255) cgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtcacca > 1:59807/1‑139 (MQ=255) ccGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGgtggtg > 2:275520/1‑139 (MQ=255) ccGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGgtggtg > 2:237749/1‑139 (MQ=255) ccGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGgtggtg > 2:146602/1‑139 (MQ=255) ttCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGtt < 1:3575/139‑1 (MQ=255) cGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGtt > 1:178215/1‑139 (MQ=255) tGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGtt > 1:227658/1‑132 (MQ=255) tGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGtt < 2:227658/132‑1 (MQ=255) aTGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt < 2:59807/139‑1 (MQ=255) aTGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt < 1:338693/139‑1 (MQ=255) aTGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt < 1:149509/139‑1 (MQ=255) cGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGcc > 1:405753/1‑138 (MQ=255) aTCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACccgc > 2:27118/1‑139 (MQ=255) cTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGt > 2:120187/1‑87 (MQ=255) cTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGt < 1:120187/87‑1 (MQ=255) gTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCa > 2:52558/1‑135 (MQ=255) aaGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGa < 1:237749/139‑1 (MQ=255) gATCCGACCGGTGGTATCTTCACCCTCACCAACGGTGGGGTGTTCGGTTCCCTGATGTCTACGCGGATCAACAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTc < 1:133245/139‑1 (MQ=255) | TGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTC > NZ_CP009273/757789‑758058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |