| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,182,954 | T→A | D248V (GAT→GTT) | roxA ← | [50S ribosomal protein L16]‑arginine 3‑hydroxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,182,954 | 0 | T | A | 100.0% | 37.8 / NA | 11 | D248V (GAT→GTT) | roxA | [50S ribosomal protein L16]‑arginine 3‑hydroxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (5/6); total (5/6) | |||||||||||
ATCCGGCTGATAAGGCGGCTCTGGCGGCGCGATATCCAGTTCATGACGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTATCCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGATCGCTGTAGTAGTTGCCGCCCAGTTCACGTTGCAGCACATAATCGGCAAATCCACTAATCAGTTCCCGCG > NZ_CP009273/1182824‑1183077 | aTCCGGCTGATAAGGCGGCTCTGGCGGCGCGATATCCAGTTCATGACGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATctct > 1:153083/1‑139 (MQ=255)aTCCGGCTGATAAGGCGGCTCTGGCGGCGCGATATCCAGTTCATGACGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATctct > 2:150165/1‑139 (MQ=255) gcgATATCCAGTTCATGACGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAgcgc > 2:65428/1‑139 (MQ=255) cAGGTCATGACGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTgg < 2:259085/138‑1 (MQ=255) cGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGAt < 1:415189/139‑1 (MQ=255) cGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGAt < 1:65428/139‑1 (MQ=255) cGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGAt < 2:153349/139‑1 (MQ=255) cTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGATCGCTGTAGTAGTTGCCGCCCAGTTCACGTTg < 2:370083/138‑1 (MQ=255) ggTTGATCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGATCGCTGTAGTAGTTGCCGCCCAGTTCACGTTGCAGCACATAATCGGCaaa > 1:223665/1‑139 (MQ=255) aTCAATTCGAGCATCATCTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGATCGCTGTAGTAGTTGCCGCCCAGTTCACGTTGCAGCACATAATCGGCAAATCCa < 2:223665/138‑1 (MQ=255) atcTCACGCAGTTTAACCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGATCGCTGTAGTAGTTGCCGCCCAGTTCACGTTGCAGCACATAATCGGCAAATCCACTAATCAGTTCCcgcg > 2:297527/1‑139 (MQ=255) | ATCCGGCTGATAAGGCGGCTCTGGCGGCGCGATATCCAGTTCATGACGTGACTGGGATATAAACTCGCCAAACCATTGCTTAAAGTGTTCCGGCTGGTTGATCAATTCGAGCATCATCTCACGCAGTTTATCCATCTCTTGCGGCAGAACATCCGCAGGATGAGCGCGAGGTGGAACATCCGGATCGCTGTAGTAGTTGCCGCCCAGTTCACGTTGCAGCACATAATCGGCAAATCCACTAATCAGTTCCCGCG > NZ_CP009273/1182824‑1183077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |