Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,260,284 | A→G | D372G (GAC→GGC) | hemA → | glutamyl‑tRNA reductase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,260,284 | 0 | A | G | 100.0% | 11.9 / NA | 5 | D372G (GAC→GGC) | hemA | glutamyl‑tRNA reductase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (2/3); total (2/3) |
AGCGAATTTATGGCGTGGCTGCGAGCACAAAGCGCCAGCGAAACCATTCGCGAGTATCGCAGCCAGGCAGAGCAAGTTCGCGATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGC > NZ_CP009273/1260157‑1260418 | aGCGAATTTATGGCGTGGCTGCGAGCACAAAGCGCCAGCGAAACCATTCGCGAGTATCGCAGCCAGGCAGAGCAAGTTCGCGATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGGCGCGCAAGCCa < 2:286223/139‑1 (MQ=255) tGGCTGCGAGCACAAAGCGCCAGCGAAACCATTCGCGAGTATCGCAGCCAGGCAGAGCAAGTTCGCGATGAGGTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGGCGCGCAAGCCATTATGCAGGATCTgg > 2:283759/1‑139 (MQ=255) tCGCAGCCAGGCAGAGCAAGTTCGCAATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGGCGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGaa < 1:170569/138‑1 (MQ=255) cAGAGCAAGTTCGCGATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGGCGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCaa > 2:422468/1‑137 (MQ=255) aCCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGGCGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATaacg < 1:328742/139‑1 (MQ=255) ggcggcggcGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCg > 2:41618/1‑139 (MQ=255) ggcggcGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGc < 1:283759/139‑1 (MQ=255) ggcggcGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGc < 1:41618/139‑1 (MQ=255) | AGCGAATTTATGGCGTGGCTGCGAGCACAAAGCGCCAGCGAAACCATTCGCGAGTATCGCAGCCAGGCAGAGCAAGTTCGCGATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGC > NZ_CP009273/1260157‑1260418 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |