| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,455,278 | T→G | R43R (CGT→CGG) | paaJ → | bifunctional 3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,455,278 | 0 | T | G | 100.0% | 40.9 / NA | 13 | R43R (CGT→CGG) | paaJ | bifunctional 3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (5/8); total (5/8) | |||||||||||
GAAGCCTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGTCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGCTGCCGCAGAGTGTTTCCGGCA > NZ_CP009273/1455142‑1455399 | gaAGCCTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGgct > 2:131227/1‑139 (MQ=255)gaAGCCTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGGGTTCGGGCTGATGATCTGGCTGCTATTCCTTTGCGGGAACTGCTGGGGCGGAACCCGCGgct > 2:279470/1‑139 (MQ=255) gCCTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCg > 1:225516/1‑138 (MQ=255) gCCTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCg < 2:225516/138‑1 (MQ=255) ccTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCGAt < 1:198872/139‑1 (MQ=255) aTGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCGATGCg < 2:185700/138‑1 (MQ=255) gCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCg < 1:131227/139‑1 (MQ=255) ccAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGGTGATGATCTGGCTGCTATCCCTTTGCGGGGACTGCTGGTGCGAAACCCGCGGCCCGATGCGGAGGGTCTCGCTGATGTGGTCTTCGGCCGTGcgtact > 2:290803/1‑134 (MQ=255) gTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCgg < 1:290803/138‑1 (MQ=255) gggCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCg < 1:39321/139‑1 (MQ=255) tCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGCGGcc > 1:306776/1‑139 (MQ=255) aaCTGCTGGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCgg < 1:133723/58‑1 (MQ=255) aaCTGCTGGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCgg > 2:133723/1‑58 (MQ=255) tgctgGAGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGGGGCCGCAGAGGGttttccg > 1:263106/1‑135 (MQ=255) ctgGTGCGAAACCCGCGGCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGCTGCCGCAGAGTGTTTCCGGca < 1:279470/139‑1 (MQ=255) | GAAGCCTGATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGTCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGCTGCCGCAGAGTGTTTCCGGCA > NZ_CP009273/1455142‑1455399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |