| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,708,538 | A→G | intergenic (+10/‑96) | dtpA → / → gstA | dipeptide/tripeptide permease DtpA/glutathione transferase GstA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,708,538 | 0 | A | G | 100.0% | 54.2 / NA | 17 | intergenic (+10/‑96) | dtpA/gstA | dipeptide/tripeptide permease DtpA/glutathione transferase GstA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (11/6); total (11/6) | |||||||||||
CTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAA > NZ_CP009273/1708451‑1708623 | ctgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGgaa < 1:1111045/90‑1 (MQ=255)ctgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGgaa > 2:1111045/1‑90 (MQ=255)ctgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAAc < 2:231628/91‑1 (MQ=255) tgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAAct > 2:158782/1‑91 (MQ=255) tgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAAct > 2:991681/1‑91 (MQ=255) tgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAAct > 2:714314/1‑91 (MQ=255) tgctgACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAAct > 2:659745/1‑91 (MQ=255) cACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACtt < 1:1124951/91‑1 (MQ=255) ggATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCtt > 2:451514/1‑91 (MQ=255) aCGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACa < 1:709180/60‑1 (MQ=255) aCGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACa > 2:709180/1‑60 (MQ=255) aCGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCttttttt > 2:442476/1‑91 (MQ=255) tGCAGACAAAGCGGCAAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTTTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGt < 1:423444/91‑1 (MQ=255) gCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGtt > 2:933993/1‑91 (MQ=255) cAGAGAAGGCGGCAAATGCAGCCGTAGCGTAAAATTCAGGGGATCTTTTTTAAAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTc < 2:985665/91‑1 (MQ=255) aaaGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCaa > 2:635104/1‑91 (MQ=255) gcggcgAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGc < 1:714314/91‑1 (MQ=255) gcggcgAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGc < 1:50973/91‑1 (MQ=255) cggcgAAAGCAGCCGTAGCGTAAAATTCAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCa > 1:41651/1‑91 (MQ=255) cAGGGGAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACaaaa > 1:368276/1‑91 (MQ=255) ggggAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAg > 2:1120324/1‑83 (MQ=255) ggggAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAg < 1:1120324/83‑1 (MQ=255) | CTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAA > NZ_CP009273/1708451‑1708623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |