| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,223,250 | T→C | V27V (GTT→GTC) | BW25113_RS06140 → | YcgL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,223,250 | 0 | T | C | 100.0% | 79.4 / NA | 22 | V27V (GTT→GTC) | BW25113_RS06140 | YcgL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (10/12); total (10/12) | |||||||||||
GTAAAAGTATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTTCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATGGGCGGAAGAAACTGGTCAATGCC > NZ_CP009273/1223162‑1223334 | gTAAAAGTATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTccc > 2:492087/1‑91 (MQ=255) aaaaGTATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTg > 2:676553/1‑91 (MQ=255) cGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTc < 1:488122/91‑1 (MQ=255) cGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTc < 1:676553/91‑1 (MQ=255) cGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTc < 2:1004712/91‑1 (MQ=255) gcagcaAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGcc < 1:130791/91‑1 (MQ=255) cagcaAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCt < 2:389940/91‑1 (MQ=255) agcaAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTc < 1:566605/91‑1 (MQ=255) aaGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGt < 2:321965/91‑1 (MQ=255) aaGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGt < 1:934134/91‑1 (MQ=255) tatGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGa > 2:752871/1‑38 (MQ=255) tatGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGa < 1:752871/38‑1 (MQ=38) tatGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTgg > 1:908949/1‑91 (MQ=255) tatGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATAAAAGGTTTTGGTCAGCCTc < 2:403592/67‑1 (MQ=255) tatGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATAAAAGGTTTTGGTCAGCCTc > 1:403592/1‑67 (MQ=255) atGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGa > 1:615510/1‑91 (MQ=255) tGTCGAAAAAAAAGACGGTTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGAt > 2:623908/1‑91 (MQ=255) tGTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGAt > 2:500347/1‑91 (MQ=255) gTCGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATg > 1:894180/1‑91 (MQ=255) cGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATggg > 2:1110413/1‑91 (MQ=255) cGAAAAAAAAGACGATTTTTCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATggg > 2:677172/1‑91 (MQ=255) tCGCGTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATGGGCGGAAGAAACTGGTCAATg < 1:623908/91‑1 (MQ=255) gcgTGTCCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATGGGCGGAAGAAACTGGTCAATGcc < 1:3690/91‑1 (MQ=255) | GTAAAAGTATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTTCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATGGGCGGAAGAAACTGGTCAATGCC > NZ_CP009273/1223162‑1223334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |