| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,135,155 | T→C | N181S (AAC→AGC) | dcd ← | dCTP deaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,135,155 | 0 | T | C | 100.0% | 102.4 / NA | 30 | N181S (AAC→AGC) | dcd | dCTP deaminase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/15); total (15/15) | |||||||||||
CAACACTAACGCAGATAACCCGGCCACCAGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGTTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAGCGCCAGCGGCAGCTTACCGGAGTTGTAG > NZ_CP009273/2135022‑2135280 | cAACACTAACGCAGATAACCCGGCCACCAGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGa > 2:542528/1‑139 (MQ=255) gCAGATAACCCGGCCACCAGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCAt > 2:91528/1‑139 (MQ=255) aTAACCCGGCCACCAGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCtt > 1:170534/1‑138 (MQ=255) cccGGCCACCAGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCAcgg < 2:612270/139‑1 (MQ=255) aGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAg < 2:263062/139‑1 (MQ=255) ggAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAAGGCGCAcccg > 2:83098/1‑137 (MQ=255) tcatcaGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCg < 1:732607/127‑1 (MQ=255) tcatcaGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGGCg > 2:732607/1‑127 (MQ=255) gCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAg > 1:599079/1‑139 (MQ=255) gCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAg < 1:346063/139‑1 (MQ=255) tcgtcAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCg > 2:804401/1‑93 (MQ=255) tcgtcAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCg < 1:804401/93‑1 (MQ=255) gAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCaaa < 2:624812/139‑1 (MQ=255) gCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTGGCACCGCCGGGCCGGAAAACGGCTCAAAGCTCAg > 1:287174/1‑118 (MQ=255) gCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCAccg < 2:254039/90‑1 (MQ=255) gCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAg < 2:287174/118‑1 (MQ=255) gCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAACTCAGCGCACCAATTAACATGCCCgg > 1:449227/1‑139 (MQ=255) gCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGGCGCAccg > 1:254039/1‑90 (MQ=255) tGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGGCGCACCGCCGGGCCGGAAAGCGGCCCAAAGCTCAGCGCACCAATTAAAAAGCCCGGACg > 1:547353/1‑139 (MQ=255) aGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAgcg < 1:91528/138‑1 (MQ=255) aGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCCCCGGGCCGGAAAACGGGCCAAAGCTCCGCGCACCAATTAAAATGCCCGGGCGCAgcgg > 1:669813/1‑138 (MQ=255) gTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCAcggcg < 2:259147/63‑1 (MQ=255) gTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCAcggcg > 1:259147/1‑63 (MQ=255) aTCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCCCCGCCGGGCCGGAAAGCGGCTCAAAACTCAGCGCACCAATTAAAATGCCCGGAAGCAGCGCCAGCgg > 2:815312/1‑138 (MQ=255) aTCGATTCGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCTGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAGCGCCAGCgg < 2:222577/138‑1 (MQ=255) cGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGcc < 1:315341/113‑1 (MQ=255) cGGCTGGCTACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGGCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGcc > 2:315341/1‑113 (MQ=255) ggctggctACCGCGCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAGCGCCAGCGGCAGCTTAc < 1:815312/138‑1 (MQ=255) cgcgCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAGCGCCAGCGGCAGCTTACCGGAGTTGTAg < 1:83098/139‑1 (MQ=255) cgcgCCCTGCTGGCTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAGCGCCAGCGGCAGCTTACCGGAGTTGTAg < 1:730693/139‑1 (MQ=255) | CAACACTAACGCAGATAACCCGGCCACCAGCACGACCAGGAGTATCATCAGCGTCGTCAGAAATCGTCTCATGGTATCCTCAATGGGCCTGAATTAGTCTTTATCGATTCGGCTGGCTACCGCGCCCTGCTGGTTGCGATATTTCGCATCTTCACGGCGGTTGTAAGGTCGCACCGCCGGGCCGGAAAGCGGCTCAAAGCTCAGCGCACCAATTAACATGCCCGGACGCAGCGCCAGCGGCAGCTTACCGGAGTTGTAG > NZ_CP009273/2135022‑2135280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |