Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 2,959,152 | A→G | F82S (TTC→TCC) | lgt ← | prolipoprotein diacylglyceryl transferase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,959,152 | 0 | A | G | 100.0% | 162.8 / NA | 46 | F82S (TTC→TCC) | lgt | prolipoprotein diacylglyceryl transferase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (23/23); total (23/23) |
AGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCGTGTTGCCAGCCACATT > NZ_CP009273/2959024‑2959286 | agaagGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTagaa < 2:66245/139‑1 (MQ=255) agaagGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTagaa < 2:677140/139‑1 (MQ=255) agaagGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTagaa < 1:576022/139‑1 (MQ=255) aCGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAgaacagaaca < 1:401489/139‑1 (MQ=255) aTAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAgg > 2:593994/1‑138 (MQ=255) caccacGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTccc > 2:558040/1‑124 (MQ=255) caccacGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTccc < 1:558040/124‑1 (MQ=255) acGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGa < 2:578832/139‑1 (MQ=255) cGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAgg > 1:29723/1‑137 (MQ=255) aTAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGc < 1:775194/139‑1 (MQ=255) tAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGcc > 1:340762/1‑139 (MQ=255) aCGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCg < 2:546410/139‑1 (MQ=255) cGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTa > 1:112383/1‑88 (MQ=255) cGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTa < 2:112383/88‑1 (MQ=255) ccAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCAt < 2:340762/139‑1 (MQ=255) ccAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGAACGGCCACAAACTGCGGGGAATTGTAGAACAGAACAAAACAAATACGACCCCCGAGGTAGACGCCGAGGAAGCCCGCa > 2:862268/1‑138 (MQ=255) aTCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAg > 2:857770/1‑125 (MQ=255) aTCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAg < 1:857770/125‑1 (MQ=255) aTCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATa > 1:426258/1‑137 (MQ=255) aGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGt < 1:76628/138‑1 (MQ=255) gccgccGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGaa < 1:724227/111‑1 (MQ=255) gccgccGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGaa > 2:724227/1‑111 (MQ=255) gccgccGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGCAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAg > 2:92188/1‑139 (MQ=255) cgTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTagaacagaa > 1:238066/1‑81 (MQ=255) cgTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTagaacagaa < 2:238066/81‑1 (MQ=255) cgTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGaa > 2:492610/1‑106 (MQ=255) cgTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGaa < 1:492610/106‑1 (MQ=255) aCATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCAtt > 2:822434/1‑139 (MQ=255) tGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTg > 2:742831/1‑59 (MQ=255) tGCCGCCGTCCCAGACACGGAACAGACACAGCGGATCGGCCATAAACTGCGGGGAATTg < 1:742831/59‑1 (MQ=255) cgTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATag > 1:144424/1‑110 (MQ=255) cgTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATag < 2:144424/110‑1 (MQ=255) ggAACAGATACAGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCg > 1:62661/1‑138 (MQ=255) gAACAGATACAGCGGATCTGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGa < 2:781735/139‑1 (MQ=255) aGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAg < 2:398629/74‑1 (MQ=255) aGCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAg > 1:398629/1‑74 (MQ=255) gCGGATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCcg > 1:159948/1‑139 (MQ=255) ggATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCcgtc > 2:236754/1‑139 (MQ=255) gATCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCcgtcg > 2:299108/1‑139 (MQ=255) tCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCgtg < 2:368119/139‑1 (MQ=255) tCGGCCATAAACTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCgtg < 2:62661/139‑1 (MQ=255) aCTGCGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCGTGTTgccagcca < 1:92188/139‑1 (MQ=255) cGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACt < 1:747817/82‑1 (MQ=255) cGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACt > 2:747817/1‑82 (MQ=255) cGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCGTGTTGCCAGCCACAtt > 2:262041/1‑139 (MQ=255) cGGGGAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCGTGTTGCCAGCCACAtt > 1:471057/1‑139 (MQ=255) | AGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGAGTAAGTTTTCAACTTCATTTTTGGTCCAGCCGCTGCCCGGACGATTCGCCCGTCGTGTTGCCAGCCACATT > NZ_CP009273/2959024‑2959286 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |