Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	3,836,431	A→G	V240A (GTC→GCC)	adeQ ←	adenine permease AdeQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	3,836,431	0	A	G	100.0%	269.4 / NA	72	V240A (GTC→GCC)	adeQ	adenine permease AdeQ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (38/34);  total (38/34)

TAAGCCCGCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT  >  NZ_CP009273/3836304‑3836564                                                                                                                                |                                                                                                                                      tAAGCCCGCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAata                                                                                                                            >  2:792746/1‑139 (MQ=255)   aGCCCGCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAatat                                                                                                                           >  1:686173/1‑138 (MQ=255)   aGCCCGCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAatat                                                                                                                           >  1:771557/1‑138 (MQ=255)     cccGCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAg                                                                                                                        >  2:455105/1‑139 (MQ=255)        gCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCg                                                                                                                     >  1:568228/1‑139 (MQ=255)        gCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCg                                                                                                                     >  1:247065/1‑139 (MQ=255)         cTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCgg                                                                                                                    <  2:350906/139‑1 (MQ=255)          tttATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGcg                                                                                                                                     <  1:237372/121‑1 (MQ=255)          tttATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGcg                                                                                                                                     >  2:237372/1‑121 (MQ=255)           ttATCAGTTACACCAATTAATGTCCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCgga                                                                                                                   <  1:97199/138‑1 (MQ=255)            tATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCgga                                                                                                                   <  1:792746/137‑1 (MQ=255)                aGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCggaatggaa                                                                                                             <  1:442235/139‑1 (MQ=255)                  ttACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCggaatggaa                                                                                                             >  1:552356/1‑137 (MQ=255)                  ttACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCggaat                                                                                                                 <  1:774714/133‑1 (MQ=255)                  ttACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCggaat                                                                                                                 >  2:774714/1‑133 (MQ=255)                    acacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGcg                                                                                                                                     <  1:789862/111‑1 (MQ=255)                    acacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGcg                                                                                                                                     >  2:789862/1‑111 (MQ=255)                    acacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         >  1:501369/1‑139 (MQ=255)                    acacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         >  2:777259/1‑139 (MQ=255)                     cacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         <  2:144307/138‑1 (MQ=255)                     cacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         <  2:190569/138‑1 (MQ=255)                     cacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         <  1:564382/138‑1 (MQ=255)                     cacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         <  2:637799/138‑1 (MQ=255)                     cacCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         <  2:89701/138‑1 (MQ=255)                      acCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGAcg                                                                                                       >  2:542188/1‑139 (MQ=255)                          aTTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGAcgccgc                                                                                                   >  2:305188/1‑139 (MQ=255)                          aTTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGAcgccgc                                                                                                   >  1:770628/1‑139 (MQ=255)                                   ccTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGaa                                                                                          >  1:423266/1‑139 (MQ=255)                                    cTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGa                                                                                                         <  2:276246/123‑1 (MQ=255)                                    cTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGaa                                                                                          >  1:475838/1‑138 (MQ=255)                                           aTCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAgg                                                                                                                       >  2:376586/1‑102 (MQ=255)                                           aTCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAgg                                                                                                                       <  1:376586/102‑1 (MQ=255)                                           aTCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCAcc                                                                                   >  1:402655/1‑138 (MQ=255)                                           aTCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCAcc                                                                                   >  1:92006/1‑138 (MQ=255)                                                        aTCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAgg                                                                                                                       >  1:130974/1‑89 (MQ=255)                                                        aTCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAgg                                                                                                                       <  2:130974/89‑1 (MQ=255)                                                        aTCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCca                                                                      >  1:838196/1‑138 (MQ=255)                                                         tCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCca                                                                      >  1:146949/1‑137 (MQ=255)                                                             cATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACAt                                                                                       <  2:551376/116‑1 (MQ=255)                                                             cATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACAt                                                                                       >  1:551376/1‑116 (MQ=255)                                                             cATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGc                                                                  >  1:311319/1‑137 (MQ=255)                                                                 aaGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGAc                                                             <  2:475838/138‑1 (MQ=255)                                                                  aGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGt                                                           <  2:195868/139‑1 (MQ=255)                                                                     agaAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTcac                                                        <  2:74553/139‑1 (MQ=255)                                                                       aaaaTGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCGCCGAAAAATAATCCACAGCAAGACGTcacca                                                      <  2:552356/139‑1 (MQ=255)                                                                       aaaaTGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTcacca                                                      >  1:659052/1‑139 (MQ=255)                                                                       aaaaTGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTcacca                                                      >  1:647592/1‑139 (MQ=255)                                                                       aaaaTGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTcacca                                                      >  2:458370/1‑139 (MQ=255)                                                                       aaaaTGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTcacca                                                      >  2:476359/1‑139 (MQ=255)                                                                             aTACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATa                                                 <  2:822478/138‑1 (MQ=255)                                                                             aTACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATa                                                 <  2:402655/138‑1 (MQ=255)                                                                              tACCGGCGAGTTCAAGTGTTAAAGCGCCGCTCAAATCTAATTCAACAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACCTCACCGAAAAATAATTCACAACAAGAAGTCGCCACAATAg                                                >  2:140886/1‑138 (MQ=255)                                                                                   gCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGaa                                                                                >  2:808135/1‑101 (MQ=255)                                                                                   gCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGaa                                                                                <  1:808135/101‑1 (MQ=255)                                                                                   gCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAAc                                            >  1:180887/1‑137 (MQ=255)                                                                                            aGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCgg                                 <  2:528376/139‑1 (MQ=255)                                                                                              tgtTAACGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCa                               <  2:92006/139‑1 (MQ=255)                                                                                                  aaCGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGt                                                           >  1:411327/1‑107 (MQ=255)                                                                                                  aaCGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGt                                                           <  2:411327/107‑1 (MQ=255)                                                                                                  aaCGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGa                            >  1:261843/1‑138 (MQ=255)                                                                                                  aaCGCGCCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGa                            >  1:757580/1‑138 (MQ=255)                                                                                                     gcgcCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAt                        <  2:686173/139‑1 (MQ=255)                                                                                                     gcgcCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAt                        <  2:501369/139‑1 (MQ=255)                                                                                                     gcgcCGCTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAt                        <  2:771557/139‑1 (MQ=255)                                                                                                        ccgcTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGAc                     >  1:36468/1‑139 (MQ=255)                                                                                                        ccgcTCAAATCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGAc                     <  2:423266/139‑1 (MQ=255)                                                                                                              aactCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat                <  2:484048/135‑1 (MQ=255)                                                                                                              aaaTCTACTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat                <  2:507193/138‑1 (MQ=255)                                                                                                                     cTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaa           <  2:838196/136‑1 (MQ=255)                                                                                                                     cTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAacac        >  1:111461/1‑139 (MQ=255)                                                                                                                     cTTCACCAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAacac        >  2:252042/1‑139 (MQ=255)                                                                                                                           cAATGGCGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTtat  <  2:261843/139‑1 (MQ=255)                                                                                                                                |                                                                                                                                      TAAGCCCGCTTTATCAGTTACACCAATTAATGTTCCTGATGAATCAAATAGGTTGATCAGCATAAAGGAGAAAATGATACCGGCGAGTTCAAGTGTTAACGCGCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT  >  NZ_CP009273/3836304‑3836564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑