| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,841,593 | A→G | F131S (TTC→TCC) | uhpC ← | MFS transporter family glucose‑6‑phosphate receptor UhpC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,841,593 | 0 | A | G | 100.0% | 252.1 / NA | 70 | F131S (TTC→TCC) | uhpC | MFS transporter family glucose‑6‑phosphate receptor UhpC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/31); total (39/31) | |||||||||||
CCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAA > NZ_CP009273/3841462‑3841725 | ccATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAg < 2:650620/137‑1 (MQ=255) acaATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCa < 1:9671/139‑1 (MQ=255) tGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCAc > 2:664673/1‑139 (MQ=255) ggAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCAcc < 1:196283/138‑1 (MQ=255) cgccgcCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACgg > 2:572682/1‑138 (MQ=255) ccgccgACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCa > 2:846087/1‑138 (MQ=255) cGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTc > 1:641670/1‑139 (MQ=255) aaaaTGCCCCCCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTGCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGcc < 2:549371/137‑1 (MQ=255) tGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCAc < 2:14969/105‑1 (MQ=255) tGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCAc > 1:14969/1‑105 (MQ=255) tGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCaaa > 1:82249/1‑138 (MQ=255) tGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACACCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCaaa > 2:311298/1‑138 (MQ=255) cccACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCa > 1:590741/1‑90 (MQ=255) cccACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCa < 2:590741/90‑1 (MQ=255) cccACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCaaa > 1:672427/1‑136 (MQ=255) cccACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCaaa > 1:464898/1‑136 (MQ=255) cccACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCaaa > 1:534941/1‑136 (MQ=255) cccACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACa < 2:534941/138‑1 (MQ=255) ccaccaACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCAcc > 2:756702/1‑94 (MQ=255) ccaccaACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCAcc < 1:756702/94‑1 (MQ=255) cgccgcGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGAt < 1:313410/139‑1 (MQ=255) gccgcGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCa < 1:767571/97‑1 (MQ=255) gccgcGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCa > 2:767571/1‑97 (MQ=255) gcTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGcc > 2:467202/1‑139 (MQ=255) cTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGccc < 2:451408/139‑1 (MQ=255) cTCGGTACATGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACACCCATAGCGACGTCGAGAAGCCAAACAGAAAGATGATAAAGcag > 2:675373/1‑137 (MQ=255) ggTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTg > 1:210417/1‑139 (MQ=255) gTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGAt < 2:672427/139‑1 (MQ=255) tACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGcc > 2:690089/1‑139 (MQ=255) tACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGcc < 1:21449/139‑1 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCaaa > 1:365632/1‑78 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCaaa < 2:365632/78‑1 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGccc > 2:421428/1‑138 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGccc > 2:597676/1‑138 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGccc > 1:309127/1‑138 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGccc > 2:786609/1‑138 (MQ=255) ccAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCt < 1:421428/139‑1 (MQ=255) aGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTAt < 1:311298/139‑1 (MQ=255) ggCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTg > 2:208827/1‑124 (MQ=255) ggCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTg < 1:208827/124‑1 (MQ=255) ggCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATc > 1:801252/1‑139 (MQ=255) ggCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATc > 1:668460/1‑139 (MQ=255) gCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGgaa < 2:249111/45‑1 (MQ=255) gCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGgaa > 1:249111/1‑45 (MQ=255) gCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGAt > 1:346333/1‑128 (MQ=255) gCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGAt < 2:346333/128‑1 (MQ=255) gCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATcc > 2:485502/1‑139 (MQ=255) cgcgCACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAAc < 1:597676/139‑1 (MQ=255) cgcACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACgg > 2:92304/1‑139 (MQ=255) cgcACACACCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACgg > 2:130709/1‑139 (MQ=255) cacacaCCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACggg > 2:784048/1‑138 (MQ=255) acCGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCAttt > 1:221660/1‑138 (MQ=255) cGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGa < 1:766196/104‑1 (MQ=255) cGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGa > 2:766196/1‑104 (MQ=255) cGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAg < 2:264324/139‑1 (MQ=255) cGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAg > 1:218271/1‑139 (MQ=255) cGGTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAg < 1:572682/139‑1 (MQ=255) gTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCa < 1:76663/47‑1 (MQ=255) gTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCa > 2:76663/1‑47 (MQ=255) gTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGAt < 2:341173/103‑1 (MQ=255) gTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGAt > 1:341173/1‑103 (MQ=255) gTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCg < 2:383635/139‑1 (MQ=255) gTGAACCCCAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCg < 1:393976/139‑1 (MQ=255) cccAGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCt > 1:362242/1‑139 (MQ=255) aGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTAt < 1:10023/103‑1 (MQ=255) aGCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTAt > 2:10023/1‑103 (MQ=255) gCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTg < 2:117103/88‑1 (MQ=255) gCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTg > 1:117103/1‑88 (MQ=255) gCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACa < 1:664673/139‑1 (MQ=255) gCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACa < 1:846087/139‑1 (MQ=255) gCCCTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCAGAGCGACGTCGAGAAGCCAAACAGAGTGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACa < 2:427059/139‑1 (MQ=255) cccTGGGAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACaa > 1:430347/1‑139 (MQ=255) | CCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGCACACACCGGTGAACCCCAGCCCTGGAAAAAGGCGTTCAGCACCCAGAGCACGGCAAACGCCCATAGCGACGTCGAGAAGCCAAACAGAATGTTGATAATGCCCGTGGCGATAAGCCCTATCCCCATAAAATAACGGGCATTTGAGCGATCGCTGACAA > NZ_CP009273/3841462‑3841725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |