Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2616965	2616970	6	2 [0]	[1] 3	ppk1	polyphosphate kinase 1

GCGGTGGAAATTATCCGTGGCGATACCATCCGTTACGCGCTGCTGGAGATCCCATCAGATAAAGTGCCGCGCTTTGTGAATTTACCGCCAG  >  NZ_CP009273/2616874‑2616964                                                                                           | gCGGTGGAAATTATCCGTGGCGATACCATCCGTTACGCGCTGCTGGAGATCCCATCAGATAAAGTGCCGCGCTTTGTGAATTTACCGCCAg  >  2:251068/1‑91 (MQ=255) gCGGTGGAAATTATCCGTGGCGATACCATCCGTTACGCGCTGCTGGAGATCCCATCAGATAAAGTGCCGCGCTTTGTGAATTTACCGCCAg  >  2:376110/1‑91 (MQ=255)                                                                                           | GCGGTGGAAATTATCCGTGGCGATACCATCCGTTACGCGCTGCTGGAGATCCCATCAGATAAAGTGCCGCGCTTTGTGAATTTACCGCCAG  >  NZ_CP009273/2616874‑2616964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑