| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 283583 | 191 (4.150) | 3 (0.070) | 3/230 | 2.8 | 1.5% | coding (1084/1611 nt) | yagH | glycoside hydrolase family 43 protein |
| ? | NZ_CP009273 | = 283644 | 225 (5.190) | coding (1145/1611 nt) | yagH | glycoside hydrolase family 43 protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/283439‑283583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGGTGTCGTCGAACGGAATGCGCAGGGTCTGCAGCTCCGGGTCAAGCGAACTGG < NZ_CP009273/283644‑283509 ACCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCG < 2:479477/139‑1ACCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCG > 2:680769/1‑139 CCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGGTCGCTTGACTCGGAGCTGCAGCGCCTGAGCATTCCGTTCGACGACACCCTCCGCTCGCCCCCCGC > 2:334568/1‑139 AAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC < 1:382571/139‑1 AAGGCCCGCAAGTAGCCGGGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCTTTCGACGACACCCTCGGCTCGCTCACCGCGCGCgc < 2:513462/139‑3 CCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC > 1:43875/1‑133 CCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC < 2:43875/133‑1 TTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCG > 1:21648/1‑101 TTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCG < 2:21648/101‑1 GCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCCACGGTCGGTTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGGGAGCGAGCCGAGGGTGTCGGCGAACG > 2:487890/1‑139 TCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGGTGTCGTCGAACGGAAT > 1:246321/1‑139 CTCACCGCGCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGGGAGCGAGCCGAGGGTGTCGTCGAACGGAATGCGCAGGGTCTGCAGCTCCGGGTC > 1:368199/1‑138 GCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGGTGTCGTCGAACGGAATGCGCAGGGTCTGCAGCTCCGGGTCAAGCGAACT < 2:492448/139‑1 GCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGGTGTCGTCGAACGGAATGCGCAGGGTCTGCAGCTCCGGGTCAAGCGAACT < 2:732811/139‑1 GCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGGTGTCGTCGAACGGAATGCGCAGGGTCTGCAGCTCCGGGTCAAGCGAACTGG > 2:275083/1‑139 ACCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/283439‑283583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGGTGTCGTCGAACGGAATGCGCAGGGTCTGCAGCTCCGGGTCAAGCGAACTGG < NZ_CP009273/283644‑283509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |