New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 = 355974138 (3.000)4 (0.100) 4/222 2.5 3.1% coding (272/1155 nt) cynX cyanate transporter CynX
?NZ_CP009273 = 355978 126 (3.010)coding (276/1155 nt) cynX cyanate transporter CynX
Rejected: Frequency below/above cutoff threshold.

Only 100 of 161 total aligned reads displayed.

CCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGGCGGCGGT  >  NZ_CP009273/355842‑356110
                                                                                                                                         |                                                                                                                                    
ccATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTag                                                                                                                                    >  1:71262‑M2/1‑137 (MQ=255)
  aTGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagca                                                                                                                                  >  1:646610‑M2/1‑135 (MQ=255)
  aTGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagca                                                                                                                                  >  1:409011‑M2/1‑135 (MQ=255)
    gggcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagc                                                                                                                                <  1:143279‑M2/139‑7 (MQ=255)
     ggcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               >  2:270497‑M2/1‑132 (MQ=255)
     ggcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               >  2:685428‑M2/1‑132 (MQ=255)
      gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               <  1:34111‑M2/138‑8 (MQ=255)
      gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               <  1:843245‑M2/138‑8 (MQ=255)
      gcgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               <  2:432363‑M2/138‑8 (MQ=255)
       cgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgca                                                                                                                             >  1:556995‑M2/1‑130 (MQ=255)
       cgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgca                                                                                                                             >  2:566754‑M2/1‑130 (MQ=255)
       cgggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgca                                                                                                                             >  2:510292‑M2/1‑130 (MQ=255)
         ggcTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCCCGCAAAGTGCGCTGCTGCTTagcagcgcac                                                                                                                            <  1:430887‑M2/139‑11 (MQ=255)
           ctggcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGc                                                                                                                         >  2:796941/1‑139 (MQ=255)
           ctggcgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGc                                                                                                                         >  1:562106/1‑139 (MQ=255)
               cgctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                                                                     >  2:551255/1‑139 (MQ=255)
                gctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtggt                                                                                                                    <  2:143279/139‑1 (MQ=255)
                 ctggcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtggtg                                                                                                                   <  1:291306/139‑1 (MQ=255)
                    gtcGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtggtgg                                                                                                                  <  1:160455/135‑1 (MQ=255)
                    gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTggtgggg                                                                                                                >  1:374369/1‑139 (MQ=255)
                    gcCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTggtgggg                                                                                                                >  1:630187/1‑139 (MQ=255)
                           gCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgcactttgcgggtaaagctcacg                                                                                                         >  2:377626‑M2/1‑110 (MQ=255)
                           gCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                                                                         <  2:822345/139‑1 (MQ=255)
                           gCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                                                                         <  1:575656/139‑1 (MQ=255)
                           gCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                                                                         <  2:34111/139‑1 (MQ=255)
                           gCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                                                                         <  2:862490/139‑1 (MQ=255)
                           gCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                                                                         <  2:856614/139‑1 (MQ=255)
                               gCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCgg                                                                                                      <  2:377368/138‑1 (MQ=255)
                                         cATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAgg                                                                                           >  2:786744/1‑139 (MQ=255)
                                           tGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCg                                                                                         >  1:618309/1‑139 (MQ=255)
                                              cAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGt                                                                                       >  1:21594/1‑138 (MQ=255)
                                                 cGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATg                                                                                   >  1:278716/1‑139 (MQ=255)
                                                   aaCGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGcc                                                                                 >  2:316356/1‑139 (MQ=255)
                                                   aaCGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGcc                                                                                 >  2:173040/1‑139 (MQ=255)
                                                      gTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTc                                                                              <  1:796941/139‑1 (MQ=255)
                                                      gTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTc                                                                              >  2:631282/1‑139 (MQ=255)
                                                       tCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCg                                                                             >  1:696574/1‑139 (MQ=255)
                                                       tCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCg                                                                             >  2:61113/1‑139 (MQ=255)
                                                               tCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgcact                                                                                                                           <  1:477897‑M2/85‑12 (MQ=255)
                                                               tCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgcact                                                                                                                           >  2:477897‑M2/1‑74 (MQ=255)
                                                               tCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               <  1:100278‑M2/81‑8 (MQ=255)
                                                               tCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcg                                                                                                                               >  2:100278‑M2/1‑74 (MQ=255)
                                                                 gCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgcactttgcgggtaaagctcacgcatcaatgcaccgacggcaatcagcaacagactgatgg                                                                   >  2:801777‑M2/1‑72 (MQ=255)
                                                                 gCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCgg                                                                                                      >  1:358952/1‑104 (MQ=255)
                                                                 gCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCgg                                                                                                      <  2:358952/104‑1 (MQ=255)
                                                                       aGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                                                                     >  2:397743/1‑83 (MQ=255)
                                                                         tCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgca                                                                                                                             <  2:707395‑M2/73‑10 (MQ=255)
                                                                         tCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTagcagcgca                                                                                                                             >  1:707395‑M2/1‑64 (MQ=255)
                                                                           tGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCgg                                                                                                      <  2:200970/94‑1 (MQ=255)
                                                                             ttGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAg                                                                                            <  1:527492/102‑1 (MQ=255)
                                                                             ttGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAg                                                                                            >  2:527492/1‑102 (MQ=255)
                                                                             ttGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcag                                                        >  2:512599/1‑138 (MQ=255)
                                                                             ttGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcag                                                        <  2:825606/138‑1 (MQ=255)
                                                                             ttGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcag                                                        <  2:243448/138‑1 (MQ=255)
                                                                             ttGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcag                                                        <  2:336053/138‑1 (MQ=255)
                                                                                   atggCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGAATCATTCAGGCGGTGATGCCTCCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 <  2:146223/136‑1 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAAcg                                                                  >  2:46727/1‑122 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 >  1:420630/1‑139 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 <  2:417719/139‑1 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 >  2:323545/1‑139 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 <  2:604065/139‑1 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 >  1:589530/1‑139 (MQ=255)
                                                                                   aTTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGATTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCCGCAGCGCa                                                 >  2:464208/1‑139 (MQ=255)
                                                                                      gCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACg                                               <  2:535249/138‑1 (MQ=255)
                                                                                        cGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCa                                            <  1:538817/139‑1 (MQ=255)
                                                                                        cGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCa                                            <  2:231948/139‑1 (MQ=255)
                                                                                          tCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACt                                          >  2:77183/1‑139 (MQ=255)
                                                                                          tCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACt                                          <  2:220586/139‑1 (MQ=255)
                                                                                                 aTTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATg                                   <  1:432363/139‑1 (MQ=255)
                                                                                                 aTTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATg                                   <  2:696574/139‑1 (MQ=255)
                                                                                                     aTGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATgggg                                <  2:843245/138‑1 (MQ=255)
                                                                                                     aTGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATgggg                                <  2:72786/138‑1 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                                                                     <  2:498718/50‑1 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTtgg                                                                                                                     >  1:498718/1‑50 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGAt                                                                                                         >  1:325912/1‑62 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCa                                            <  1:387760/123‑1 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCtgt                            >  1:212922/1‑139 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCtgt                            >  1:197687/1‑139 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCtgt                            >  1:782750/1‑139 (MQ=255)
                                                                                                        cGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCtgt                            >  1:840817/1‑139 (MQ=255)
                                                                                                          tGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCGGCGCACGCCACTGGGGATGGGGCTGTgg                          >  2:896091/1‑139 (MQ=255)
                                                                                                          tGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCa                                                 <  1:361429/116‑1 (MQ=255)
                                                                                                          tGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTgg                          >  1:186251/1‑139 (MQ=255)
                                                                                                            aGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAgcg                                                   >  2:774120/1‑112 (MQ=255)
                                                                                                            aGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGGTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTc                        >  2:619655/1‑139 (MQ=255)
                                                                                                             gCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTcc                       >  2:636960/1‑139 (MQ=255)
                                                                                                             gCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTcc                       <  1:516292/139‑1 (MQ=255)
                                                                                                              cTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCcg                      <  1:418339/139‑1 (MQ=255)
                                                                                                                 tACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCgg                   >  2:529883/1‑139 (MQ=255)
                                                                                                                  aCCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCgg                   <  1:649979/138‑1 (MQ=255)
                                                                                                                            gTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATggg         <  1:268350/139‑1 (MQ=255)
                                                                                                                             tGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTcag                                                        <  1:881291/91‑1 (MQ=255)
                                                                                                                                 ctgctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGc                                              >  1:466706/1‑97 (MQ=255)
                                                                                                                                  tgctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACg                                               >  1:749148/1‑95 (MQ=255)
                                                                                                                                  tgctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACg                                               <  2:749148/95‑1 (MQ=255)
                                                                                                                                  tgctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGgcggcg    >  2:387212/1‑138 (MQ=255)
                                                                                                                                  tgctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGgcggcg    <  1:387212/138‑1 (MQ=255)
                                                                                                                                   gctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCtg                             <  1:601256/112‑1 (MQ=255)
                                                                                                                                   gctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCtg                             >  2:601256/1‑112 (MQ=255)
                                                                                                                                    ctgctTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGGCGGCGGt  <  1:851107/138‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                    
CCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCC‑GCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGGCGGCGGT  >  NZ_CP009273/355842‑356110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.