| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 269666 = | NA (NA) | 39 (0.800) | 28/246 | 0.4 | 100% | intergenic (+2/+146) | ykfC/BW25113_RS01325 | reverse transcriptase domain‑containing protein/IS5‑like element IS5 family transposase |
| ? | NZ_CP009273 | = 481436 | 0 (0.000) | coding (220/648 nt) | acrR | multidrug efflux transporter transcriptional repressor AcrR | |||||
GGGGTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACAAATGCGAATTTG > NZ_CP009273/481298‑481574 | ggggTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTag > 2:20322/1‑139 (MQ=255) catcCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggt < 2:840392‑M2/139‑8 (MQ=255) ccACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgc < 2:250539‑M2/138‑10 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAgg < 2:458458‑M1/19‑1 (MQ=255) cTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcg < 1:123043‑M2/139‑19 (MQ=255) ggCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggg < 2:525784‑M2/138‑21 (MQ=255) gagaTTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaa > 1:511153‑M2/1‑115 (MQ=255) ctgaactcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTg > 1:745661‑M1/107‑137 (MQ=255) gCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattctt > 2:210977‑M2/1‑109 (MQ=255) cAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttc > 2:325155‑M2/1‑108 (MQ=255) aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGAt > 2:444361‑M1/104‑139 (MQ=255) aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGAt > 1:474455‑M1/104‑139 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCActc > 1:868217‑M1/98‑139 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCActc > 1:249434‑M1/98‑139 (MQ=255) tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCActct < 2:612807‑M1/43‑1 (MQ=255) gcTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgac > 2:99030‑M2/1‑100 (MQ=255) tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 2:18028‑M1/95‑138 (MQ=255) tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 2:523806‑M1/95‑138 (MQ=255) tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 1:746811‑M1/95‑138 (MQ=255) tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 1:642609‑M1/95‑138 (MQ=255) tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 1:612779‑M1/95‑138 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAg < 1:156659‑M1/46‑1 (MQ=255) gcgcgGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc > 1:640760‑M2/1‑89 (MQ=255) cgGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt < 1:54859‑M2/139‑54 (MQ=255) ggTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 1:592412‑M2/139‑55 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggactggttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATAtt > 1:612807‑M1/78‑139 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc < 2:81318‑M1/44‑1 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 1:81318‑M1/71‑114 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCAt > 2:156659‑M1/71‑139 (MQ=255) tGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 2:635222‑M2/137‑65 (MQ=255) tGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 1:695605‑M2/137‑65 (MQ=255) ttttAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt < 2:497307‑M2/112‑45 (MQ=255) ttttAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 1:497307‑M2/1‑68 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 2:726345‑M1/59‑102 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc < 1:726345‑M1/44‑1 (MQ=255) ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCa < 1:465733‑M1/82‑1 (MQ=255) aCAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct > 2:599553‑M2/1‑60 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACgg < 1:483247‑M1/85‑1 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAagaga < 2:79321‑M1/56‑1 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAagaga > 1:79321‑M1/53‑108 (MQ=255) ggATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta > 1:635222‑M2/1‑53 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACag < 2:571046‑M1/91‑1 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACag < 1:611052‑M1/91‑1 (MQ=255) ttCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:331980‑M2/139‑94 (MQ=255) acaaacatgatctcatatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACgg < 1:228592‑M1/99‑1 (MQ=255) aGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 1:250539‑M2/1‑43 (MQ=255) gTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 1:74614‑M2/139‑98 (MQ=255) tGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:905518‑M2/138‑98 (MQ=255) tGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:738048‑M2/138‑98 (MQ=255) gaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc > 2:54859‑M2/1‑38 (MQ=255) gaTCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc > 1:525784‑M2/1‑38 (MQ=255) tCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc < 1:143475‑M2/138‑103 (MQ=255) tCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc < 1:429177‑M2/138‑103 (MQ=255) atatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGAt < 2:510130‑M1/36‑1 (MQ=255) atatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGAt > 1:510130‑M1/27‑62 (MQ=255) atatcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGAt < 2:467384‑M1/113‑1 (MQ=255) tcagggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATgg > 1:458458‑M1/24‑138 (MQ=255) tGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc < 1:747483‑M2/139‑113 (MQ=255) tGTCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttaatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc < 1:180172‑M2/139‑113 (MQ=255) tCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt < 2:447591‑M2/139‑115 (MQ=255) tCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 1:610425‑M2/1‑25 (MQ=255) tCAGAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 2:610425‑M2/123‑99 (MQ=255) ggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCActct < 1:602235‑M1/43‑1 (MQ=255) ggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCActct > 2:602235‑M1/20‑62 (MQ=255) ggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 2:192110‑M1/20‑63 (MQ=255) ggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc < 1:192110‑M1/44‑1 (MQ=255) ggacttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGAt < 1:223608‑M1/119‑1 (MQ=255) gAATCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc < 2:426650‑M2/139‑118 (MQ=255) cttgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATtata < 2:739450‑M1/123‑1 (MQ=255) aTCCAATATTGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 2:247860‑M2/1‑20 (MQ=255) tgttcgcaccttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATAtt < 1:543049‑M1/125‑1 (MQ=255) tGGTGAACTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt < 2:777608‑M2/138‑128 (MQ=255) accttccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACaaa < 1:639147‑M1/132‑1 (MQ=255) tccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc < 2:898832‑M1/44‑1 (MQ=255) tccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACtctc > 1:898832‑M1/4‑47 (MQ=255) tccCTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACAAATGc < 1:188917‑M1/135‑1 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta < 1:385409‑M2/139‑137 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt > 2:831080‑M2/1‑3 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat < 2:333102‑M2/139‑138 (MQ=255) gggaaggtgcgaataagcggtgaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat > 2:870602‑M2/1‑1 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc < 2:127317‑M2/139‑139 (MQ=255) | GGGGTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACAAATGCGAATTTG > NZ_CP009273/481298‑481574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |