| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | 74 (1.160) | 99 (1.550) | 50/240 | 0.1 | 57.2% | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
Only 100 of 179 total aligned reads displayed.
GGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCC > NZ_CP009273/359966‑360241 | gccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaatta > 2:783674‑M1/139‑139 (MQ=255) gttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaatt < 2:1166948‑M1/4‑1 (MQ=255) aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 1:299219/1‑139 (MQ=255) tcaatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCt > 1:236832/1‑139 (MQ=255) aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg < 2:418337/138‑1 (MQ=255) cgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg < 1:1065212‑M1/9‑1 (MQ=255) cgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 2:356536‑M1/129‑137 (MQ=255) cgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 2:385722‑M1/129‑137 (MQ=255) tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCAAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 1:107273/1‑139 (MQ=255) cgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTa < 1:869776‑M1/16‑1 (MQ=255) ccTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcg < 2:236832/138‑1 (MQ=255) tgtgGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcg > 2:1002794/1‑139 (MQ=255) gtgGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcg < 1:719032/138‑1 (MQ=255) cgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcgggcg > 2:924364‑M1/114‑138 (MQ=255) gctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑c > 1:346659‑M1/113‑139 (MQ=255) ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑cc > 2:63368/1‑139 (MQ=255) ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑cc > 2:741095/1‑139 (MQ=255) ctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑cc < 1:163032‑M1/28‑1 (MQ=255) ctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑cc < 1:1052213‑M1/28‑1 (MQ=255) ccggcggatttgtcctccgcaggagggcattcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttattggatgcctgggcaattAATCCCTGGCAGTTTATGGCGGGCGT‑CCTGc > 2:371999‑M1/109‑139 (MQ=255) cggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGcc > 2:576661‑M1/108‑139 (MQ=255) aCATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCg < 2:86340/139‑1 (MQ=255) ggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 2:1052213‑M1/104‑139 (MQ=255) ggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 1:568444‑M1/104‑139 (MQ=255) ggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 1:1069548‑M1/104‑139 (MQ=255) aTCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc < 1:1002794/139‑1 (MQ=255) aTCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc < 1:907183/139‑1 (MQ=255) cAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCAc < 2:499412/138‑1 (MQ=255) cTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑c < 1:418678/119‑1 (MQ=255) cTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc < 2:523313/128‑1 (MQ=255) aggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑GCTTCCCGCCACCcctccggtcgtt < 2:827559‑M1/51‑6 (MQ=255) aggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCg > 2:446953‑M1/89‑137 (MQ=255) aggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGt > 1:549146‑M1/89‑138 (MQ=255) gagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg < 1:731292‑M1/9‑1 (MQ=255) gagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 2:1219498‑M1/87‑122 (MQ=255) gCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 2:680937/1‑121 (MQ=255) gCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc < 1:680937/121‑1 (MQ=255) agcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 1:134988‑M1/84‑119 (MQ=255) agcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc < 2:134988‑M1/36‑1 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTTGc > 1:290854/1‑139 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCCCCACCC‑CCCCGGCCGCTGCTTccc > 2:1066992/1‑137 (MQ=39) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTg > 1:1189604‑M1/82‑89 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑c > 1:17911‑M1/82‑108 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑c > 1:834325‑M1/82‑108 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑c < 2:17911‑M1/27‑1 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc < 1:467320‑M1/36‑1 (MQ=255) cgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGG‑TCCGCCCCCCCCCC‑CCCGGggcgttggtttgt < 2:1281435‑M1/58‑7 (MQ=255) gttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGc < 1:62104‑M1/58‑1 (MQ=255) gttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCa > 1:1157502‑M1/81‑139 (MQ=255) tcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑GCTTCCCGCCACCC‑CCCTTGCTCTtgcttcctatc < 2:168191‑M1/61‑6 (MQ=255) tcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGGTGCTTCGCaa < 1:1094976‑M1/60‑1 (MQ=255) accgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTAt > 1:592115‑M1/77‑93 (MQ=255) caacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCg > 1:1268733‑M1/68‑139 (MQ=255) aacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCg > 2:1243532‑M1/58‑106 (MQ=255) ccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCCCCCCCC‑CCCCGGCCGTTGCTTTGCAACGGTCCAAACCGCTCCccgcggg > 2:285909/1‑138 (MQ=25) ccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGG‑CCTGCCCCCCCCCC‑CCCCGGCCGCTGCTTCGCCACGCTCAAATCCGCCCCccgcggg > 2:566801/1‑138 (MQ=25) cAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGgtcgt‑c > 1:330431/1‑78 (MQ=255) cAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑c < 2:330431/78‑1 (MQ=255) ggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 2:869776‑M1/51‑139 (MQ=255) ggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:1066992‑M1/51‑139 (MQ=255) ggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:1147607‑M1/51‑139 (MQ=255) ggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:1166948‑M1/51‑139 (MQ=255) ggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 1:392960‑M1/51‑139 (MQ=255) ggcccagtctttcaactgagcctttcgttttatttgatgccgggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 2:307156‑M1/51‑139 (MQ=255) aGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc < 1:1228800/139‑1 (MQ=255) tGCAGGAGCTCCGATGATAAGCTGCCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGcc > 1:172459/1‑80 (MQ=255) cagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc > 2:909078‑M1/47‑135 (MQ=255) cagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCCCTCCCGGCGGATTTGTc < 1:909078‑M1/89‑1 (MQ=255) agtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGcc > 2:49076‑M1/46‑77 (MQ=255) agtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGG‑CCCGCCCGCCCCCC‑TCCCGGCCGTTGTGTCTCAACATTCAAATCCGCCCCCGGCGggtttgttcctct < 2:95583‑M1/94‑7 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCCGCCCCCCCCCC‑CCCCCGCCCTTGCTTTGCAACGTTCAAATCCCCCCCCCGCGGGTTTGTCCTACt > 2:549146/1‑139 (MQ=21) gtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTTCCCCCCACCC‑CCCCCGCCGTTGGTTCTCTACGTTCAAATACCCTCCCGGCGGGTTTTTCCTtctc < 2:434567‑M1/95‑1 (MQ=255) cgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCCCCC‑CCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCCCCCGGCGGGTTTTTCCTACTCCGga < 1:944247‑M1/99‑1 (MQ=255) ccGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcg < 2:685443/59‑1 (MQ=255) ccGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCt < 2:1179989/67‑1 (MQ=255) gatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCCCCC‑CCCGGGCCGGTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTTTCCTACTCCGGAGAGCggt > 1:515363/1‑137 (MQ=18) gagcctttcgttttatttgatgcctggggaattAATTcc > 1:1003619‑M1/34‑39 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTgg < 2:201926‑M1/9‑1 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTgg > 1:201926‑M1/34‑42 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 2:408949‑M1/34‑69 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGc < 1:6446‑M1/73‑1 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGc > 2:6446‑M1/34‑106 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGG‑CCTGGCCGCCACCC‑CCCGGGCCGGTGCTTTGCAACTTTTAAAACCCCTCCCCGCGGGTTTTTTCTACTCAGGAGAGCGtt < 2:618702‑M1/106‑1 (MQ=255) gcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCCCCC‑TCCCGGCCGTTGCTTTGCAAAGTTCAAATCCCCCCCCCGCGGGTTTGTCCTTCTCAGGGgagcggtcc < 1:1227639‑M1/108‑5 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTTCCCCCCCCCC‑CCCGGGCCGTTGCTTTGCAACGTTTAAATCCCCTCCCCGCGGATTTTTCCTCCCCCAGAGAGCGGTCACCGac > 1:783674/1‑138 (MQ=17) tCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGcc > 1:1213908/1‑60 (MQ=255) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTTCCCGCCACCC‑TCCGGGCCGTTGCTTTGCAAAGTTTAAATCCCCCCCCCGCGGGGTTGTCCTACTCAGGAGAGCGTTCACCGacaaacaa > 1:356536/1‑136 (MQ=17) tgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTTCCCGCCCCCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCCCCCGGCGGGTTTGTTCTTCTCAGGGGGGGGGTCACCGACAAAAAAAAGATa < 1:437079‑M1/125‑1 (MQ=255) ttCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCCTCCCTGCCC‑CCCCCC‑TCCCGGCCGTTGCTTTCCAAAGGTTAAATCCGCCCCCCGCGGGTTTTTCCTTTTCAGGAGGGCGTTTACCGCCAAACACCCGGTaaa > 2:102345/1‑138 (MQ=9) cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑GCCGCCCCCCACCC‑CCCGGGGCGGTGCTTTGCAAAGTTCAAATTCGCCCCCCGCGGGATTTTCCTACTCAGGAGAGGGGTTACCTACAAACAACAGATaaaaag > 1:385722/1‑136 (MQ=9) cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGa < 2:18561/139‑1 (MQ=40) gggaattAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑CCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaa > 2:575992‑M1/8‑139 (MQ=255) aTCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCCCCCCCC‑CCCCGGCCGTTGCTTTGCAACCTTCAAATCCGCCCCCCGCGGGTTTTTTCTCCTCAGGGGAGGGTTTACCGCCAAACAACAGATAAAAAGaa > 2:1079365/1‑138 (MQ=11) cccAATTCCTGGCAGTTTATGGCGGGCGG‑CCTGCCCCCCCCCC‑CCCCGGCCGTTGCCTCTCAACGTTCCAATCCCCCCCCCGCGGGTTTTTCCTACTCCGGGGGGCGGTCCCCCACAAACAACAGATAAAAAGAAAAGc > 2:1062381/1‑139 (MQ=2) cAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc < 2:1115507/139‑1 (MQ=33) cAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc < 1:1079365/139‑1 (MQ=33) aaTTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCt < 2:1210107/74‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc < 1:49952/138‑1 (MQ=33) aaTTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc < 1:628045/138‑1 (MQ=33) aaTTCCTGGCAGTTTATGGCGGACGT‑CCTGCCCGCCGCCC‑TCCGGTCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTACTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACTAAAGGccc < 2:1235216/138‑1 (MQ=11) | GGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCC‑TCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCC > NZ_CP009273/359966‑360241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |