Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092731,436,8530TC53.0% ‑5.4 / 131.1 83D83G (GAC→GGC) ldhAD‑lactate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (20/19);  new base C (21/23);  total (41/42)
Fisher's exact test for biased strand distribution p-value = 8.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01
Rejected as consensus: E-value score below prediction cutoff.
Rejected as consensus: Frequency below/above cutoff threshold.

TCACGGGTACGCTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGCCATTGGCAGTTTTAG  >  NZ_CP009273/1436715‑1436985
                                                                                                                                          |                                                                                                                                    
tCACGGGTACGCTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGt                                                                                                                                      <  1:616876/139‑1 (MQ=255)
     ggTACGCTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACg                                                                                                                                 <  2:333140/139‑1 (MQ=255)
       tACGCTGATACGCGCGGTGAATACGGCGGTTTAGCGTCATCATCATACCGATGGGGAGGTCAGCAACGGGCTCTGGGTCCTAGGCTGGGACACGGGCTTCCTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCCACggt                                                                                                                               >  2:553817/1‑137 (MQ=255)
        aCGCTGATACGCGCGGTGAATACGGCGGTTTCGCGTCATCATCCTACCGATGGCGTGTTTTGCAACGGCCCCTGGGTCATAGGCTGGAACACGGGCTACTTTTCGCCCCCGGTTTTTTGCCCCCTCCAGGCCGCCGGTa                                                                                                                              >  2:635040/1‑139 (MQ=255)
          gCTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTAtt                                                                                                                            <  1:140478/139‑1 (MQ=255)
          gCTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTAtt                                                                                                                            <  2:793405/139‑1 (MQ=255)
           cTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTTCCGCGTCAAGGTCGACGTTAtt                                                                                                                            >  1:297565/1‑138 (MQ=255)
                                gcggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCg                                                                                                      <  1:760703/139‑1 (MQ=255)
                                gcggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCg                                                                                                      <  1:902603/139‑1 (MQ=255)
                                gcggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCg                                                                                                      <  2:350158/139‑1 (MQ=255)
                                  ggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGat                                                                                                    <  2:297565/139‑1 (MQ=255)
                                  ggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGat                                                                                                    <  2:543526/139‑1 (MQ=255)
                                  ggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGat                                                                                                    <  1:1114193/139‑1 (MQ=255)
                                  ggTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGat                                                                                                    <  1:741626/139‑1 (MQ=255)
                                              tcatcatACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAAc                                                                                                                       <  2:530396/108‑1 (MQ=255)
                                              tcatcatACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAAc                                                                                                                       >  1:530396/1‑108 (MQ=255)
                                                   atACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCt                                                                                   >  2:258333/1‑139 (MQ=255)
                                                     aCCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCttt                                                                                 >  2:763414/1‑139 (MQ=255)
                                                         aTGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAg                                                                                                          >  2:869653/1‑110 (MQ=255)
                                                         aTGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAg                                                                                                          <  1:869653/110‑1 (MQ=255)
                                                         aTGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCttttt                                                                               >  2:667155/1‑137 (MQ=255)
                                                         aTGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGa                                                                                                                          <  1:35006/94‑1 (MQ=255)
                                                         aTGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGa                                                                                                                          >  2:35006/1‑94 (MQ=255)
                                                         aTGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCttttt                                                                               >  1:64358/1‑137 (MQ=255)
                                                          tGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAg                                                                            >  1:632990/1‑139 (MQ=255)
                                                           ggCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCg                                                                                       >  2:628671/1‑127 (MQ=255)
                                                           ggCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCg                                                                                       <  1:628671/127‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  1:1244918/138‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCa                                                                                                           <  2:1163955/106‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCa                                                                                                           >  1:1163955/1‑106 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  1:402809/138‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  2:152102/138‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  2:1104611/138‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  1:766158/138‑1 (MQ=255)
                                                            gCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  1:330803/138‑1 (MQ=255)
                                                               tgtTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  2:604854/135‑1 (MQ=255)
                                                               tgtTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           >  1:604854/1‑135 (MQ=255)
                                                                      cAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           >  1:1115916/1‑128 (MQ=255)
                                                                      cAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  2:1115916/128‑1 (MQ=255)
                                                                           gCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCa                                                                             <  1:249844/121‑1 (MQ=255)
                                                                           gCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCa                                                                             >  2:249844/1‑121 (MQ=255)
                                                                           gCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTCAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGggc                                                           >  1:718539/1‑139 (MQ=255)
                                                                              tctGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           >  2:1159448/1‑120 (MQ=255)
                                                                              tctGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  1:1159448/120‑1 (MQ=255)
                                                                              tctGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  1:183945/120‑1 (MQ=255)
                                                                              tctGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           >  2:183945/1‑120 (MQ=255)
                                                                                tGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGggcggc                                                        <  1:735623/137‑1 (MQ=255)
                                                                                tGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGggcggc                                                        <  1:726744/137‑1 (MQ=255)
                                                                                      aTAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCa                                                >  2:85945/1‑139 (MQ=255)
                                                                                          gCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCa                                                                                                           <  2:474375/76‑1 (MQ=255)
                                                                                          gCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCa                                                                                                           >  1:474375/1‑76 (MQ=255)
                                                                                           cTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGtt                                           <  2:632990/139‑1 (MQ=255)
                                                                                            tGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGtt                                           >  2:730149/1‑138 (MQ=255)
                                                                                            tGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAAc                                                                                                                       <  1:36139/62‑1 (MQ=255)
                                                                                            tGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAAc                                                                                                                       >  2:36139/1‑62 (MQ=255)
                                                                                            tGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGtt                                           >  2:345736/1‑138 (MQ=255)
                                                                                             ggAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTa                                         >  1:589891/1‑139 (MQ=255)
                                                                                             ggAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTa                                         >  2:377749/1‑139 (MQ=255)
                                                                                             ggAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTa                                         >  1:1220057/1‑139 (MQ=255)
                                                                                              gAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATAtt                                                                                               >  2:1236997/1‑84 (MQ=255)
                                                                                              gAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATAtt                                                                                               <  1:1236997/84‑1 (MQ=255)
                                                                                              gAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTAc                                        >  1:891427/1‑139 (MQ=255)
                                                                                              gAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTAc                                        >  1:662891/1‑139 (MQ=255)
                                                                                               aaCACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACg                                       <  1:1229927/139‑1 (MQ=255)
                                                                                                  acGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGaaa                                    <  1:1064019/139‑1 (MQ=255)
                                                                                                  acGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGaaa                                    <  2:285104/139‑1 (MQ=255)
                                                                                                    ggACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTAtt                                                                                                                            >  1:74557/1‑49 (MQ=255)
                                                                                                    ggACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTAtt                                                                                                                            <  2:74557/49‑1 (MQ=255)
                                                                                                    ggACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGaaaa                                   >  1:1089801/1‑138 (MQ=255)
                                                                                                       ctactTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAataca                               <  2:662891/139‑1 (MQ=255)
                                                                                                       ctactTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAataca                               <  1:300142/139‑1 (MQ=255)
                                                                                                             tCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCg                          <  1:667155/138‑1 (MQ=255)
                                                                                                               aGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGaaa                                    <  2:1283343/126‑1 (MQ=255)
                                                                                                               aGCCCCAGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGaaa                                    >  1:1283343/1‑126 (MQ=255)
                                                                                                                 ccccAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCg                     <  2:1089801/139‑1 (MQ=255)
                                                                                                                    cAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAg                  >  2:1158947/1‑139 (MQ=255)
                                                                                                                     aGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           >  1:1127160/1‑81 (MQ=255)
                                                                                                                     aGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGc                                                                           <  2:1127160/81‑1 (MQ=255)
                                                                                                                     aGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGc                 >  1:1031356/1‑139 (MQ=255)
                                                                                                                     aGTTCTTTTGCCGCGTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGc                 >  2:780339/1‑139 (MQ=255)
                                                                                                                                 gcgTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGCCATTGGCAGttt     >  2:369055/1‑139 (MQ=255)
                                                                                                                                 gcgTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGCCATTGGCAGttt     >  2:838142/1‑139 (MQ=255)
                                                                                                                                  cgTCAAGGCCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGCCATTGGCAGttt     >  2:1217832/1‑138 (MQ=255)
                                                                                                                                    tCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGCCATTGGCAGTTTTAg  >  1:443886/1‑139 (MQ=255)
                                                                                                                                          |                                                                                                                                    
TCACGGGTACGCTGATACGCGCGGTGAATACGGCGGTTCAGCGTCATCATCATACCGATGGCGTGTTCAGCAACGGCCTCTGGATCATAGGCTGGAACACGGACTACTTTCAGCCCCAGTTCTTTTGCCGCGTCAAGGTCGACGTTATTGAAACCGGCACAGCGCAGGGCGATATATTTAACGCCGTGCTTTTTCAGCTCTTCCAGCACCGGGCGGCTGCCGTCATCGTTTACGAAAATACATACCGCTTCGCAGCCATTGGCAGTTTTAG  >  NZ_CP009273/1436715‑1436985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑