Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092731,505,5650AC62.1% 83.5 / 75.9 66N436H (AAC→CAC) ydcRPLP‑dependent aminotransferase family protein
Reads supporting (aligned to +/- strand):  ref base A (12/13);  new base C (20/21);  total (32/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ATCATAATGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTTTAATTTAATTCCTCTTAGA  >  NZ_CP009273/1505437‑1505692
                                                                                                                                |                                                                                                                               
atcatAATGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACg                                                                                                                       >  2:752031/1‑139 (MQ=255)
       tGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTc                                                                                                                >  1:376644/1‑139 (MQ=255)
       tGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTc                                                                                                                >  2:82106/1‑139 (MQ=255)
               gTTACTTTCTCTGGTTGGAGCTCCCCGCGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTaa                                                                                                        >  1:286998/1‑139 (MQ=255)
               gTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTaa                                                                                                        <  2:376644/139‑1 (MQ=255)
                     ttCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATa                                                                                                      >  1:918205/1‑135 (MQ=255)
                     ttCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATa                                                                                                      <  2:918205/135‑1 (MQ=255)
                      tctcTGGTTGGGGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTGCCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACcg                                                                                                   <  1:675344/137‑1 (MQ=255)
                       ctctGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACcgcg                                                                                                 <  2:795660/138‑1 (MQ=255)
                       ctctGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACcgcg                                                                                                 <  1:731428/138‑1 (MQ=255)
                       ctctGGTTGGAGCCCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACcgcg                                                                                                 <  2:708803/138‑1 (MQ=255)
                        tctGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTg                                                                                               >  2:957932/1‑139 (MQ=255)
                         ctGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTgg                                                                                              >  1:918795/1‑139 (MQ=255)
                          tGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTgg                                                                                              >  1:446586/1‑138 (MQ=255)
                          tGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCAGATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTg                                                                                               <  2:286998/137‑1 (MQ=255)
                            gTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAg                                                                                           <  2:248783/139‑1 (MQ=255)
                             ttGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGt                                                                                          >  2:771995/1‑139 (MQ=255)
                                  gCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGga                                                                                     <  2:1166048/139‑1 (MQ=255)
                                  gCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGga                                                                                     <  1:771995/139‑1 (MQ=255)
                                      cccGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGgaga                                                                                   <  1:488327/137‑1 (MQ=255)
                                              gTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTgaagaa                                                                         <  2:773779/139‑1 (MQ=255)
                                                       cGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGt                                                                 >  1:837855/1‑138 (MQ=255)
                                                       cGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGt                                                                                          >  2:913569/1‑113 (MQ=255)
                                                       cGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGt                                                                                          <  1:913569/113‑1 (MQ=255)
                                                         gCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACa                                                                       <  1:669701/130‑1 (MQ=255)
                                                         gCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACa                                                                       <  1:221043/130‑1 (MQ=255)
                                                         gCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACa                                                                       >  2:669701/1‑130 (MQ=255)
                                                         gCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACa                                                                       >  2:221043/1‑130 (MQ=255)
                                                         gCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTaa                                                               >  1:1064802/1‑138 (MQ=255)
                                                                            aCTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTAtt                                           >  2:956176/1‑139 (MQ=255)
                                                                             cTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGgaga                                                                                   >  1:157638/1‑98 (MQ=255)
                                                                             cTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGgaga                                                                                   <  2:157638/98‑1 (MQ=255)
                                                                                 cGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGa                                      <  1:412639/139‑1 (MQ=255)
                                                                                 cGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGa                                      <  2:837855/139‑1 (MQ=255)
                                                                                 cGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGa                                      <  2:1064802/139‑1 (MQ=255)
                                                                                 cGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGa                                      <  1:7173/139‑1 (MQ=255)
                                                                                   catcatATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAAc                                    <  1:82106/139‑1 (MQ=255)
                                                                                   catcatATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAAc                                    <  2:446586/139‑1 (MQ=255)
                                                                                     tcatATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTg                                                                                               <  1:9515/78‑1 (MQ=255)
                                                                                     tcatATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTg                                                                                               >  2:9515/1‑78 (MQ=255)
                                                                                     tcatATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAAc                                    <  2:1285127/137‑1 (MQ=255)
                                                                                     tcatATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAAc                                    >  1:1285127/1‑137 (MQ=255)
                                                                                      catATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGc                                 >  2:75499/1‑139 (MQ=255)
                                                                                          tCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGt                              >  1:314124/1‑138 (MQ=255)
                                                                                                ttGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCaaa                                                 >  1:927251/1‑113 (MQ=255)
                                                                                                ttGCGCCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCaaa                                                 <  2:927251/113‑1 (MQ=255)
                                                                                                ttGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCg                       >  2:972274/1‑139 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGga                                                                                     >  2:1137834/1‑74 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGga                                                                                     <  1:1137834/74‑1 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGtt                     >  2:560558/1‑138 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGtt                     >  1:1266856/1‑138 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGAGtt                     >  2:667265/1‑138 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGc                                                                                             >  2:1067392/1‑66 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGc                                                                                             <  1:1067392/66‑1 (MQ=255)
                                                                                                   cgcCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGtt                     <  1:450839/138‑1 (MQ=255)
                                                                                                        ggTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTg                                                                                               <  2:1254237/59‑1 (MQ=255)
                                                                                                        ggTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTg                                                                                               >  1:1254237/1‑59 (MQ=255)
                                                                                                        ggTAAAATGTTTTCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGtttaatt                >  2:1142008/1‑138 (MQ=255)
                                                                                                        ggTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTc                                                                                                                <  2:793993/42‑1 (MQ=255)
                                                                                                        ggTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTc                                                                                                                >  1:793993/1‑42 (MQ=255)
                                                                                                        ggTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGtttaatt                >  1:228198/1‑138 (MQ=255)
                                                                                                            aaaTGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTttaatttaat            <  2:726160/138‑1 (MQ=255)
                                                                                                              aTGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTTTAATTTAATTcc         <  1:957932/139‑1 (MQ=255)
                                                                                                                 ttttCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTTTAATTTAATTCctc       <  2:1266856/138‑1 (MQ=255)
                                                                                                                  tttCTACCGGTGAACACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTTTAATTTAATTCctct      >  1:32789/1‑138 (MQ=255)
                                                                                                                        ccGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTTTAATTTAATTCCTCTTAGa  <  1:972274/136‑1 (MQ=255)
                                                                                                                                |                                                                                                                               
ATCATAATGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAATAGCGTTTAATTTAATTCCTCTTAGA  >  NZ_CP009273/1505437‑1505692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑