BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	2,068,298	A→C	A13A (GCA→GCC)	BW25113_RS10450 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	2,068,298	0	A	C	99.1%	408.6 / ‑3.7	113	A13A (GCA→GCC)	BW25113_RS10450	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (59/53); total (60/53)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01

Only 100 of 113 total aligned reads displayed.

CCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTT  >  NZ_CP009273/2068164‑2068432

ccGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGAt                                                                                                                                    >  1:1123740/1‑139 (MQ=255)

 cGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGAtt                                                                                                                                   >  1:355295/1‑139 (MQ=255)

   gTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTg                                                                                                                                 >  2:494977/1‑139 (MQ=255)

   gTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTg                                                                                                                                 >  1:936762/1‑139 (MQ=255)

     catcatGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGc                                                                                                                                >  1:1004701/1‑138 (MQ=255)

        catGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCAtt                                                                                                                            >  1:1024000/1‑139 (MQ=255)

                ggACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCt                                                                                                                    >  2:1122285/1‑139 (MQ=255)

                ggACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCG‑‑GCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCttt                                                                                                                  >  1:715321/1‑139 (MQ=255)

                 gACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCtt                                                                                                                   <  1:1107129/139‑1 (MQ=255)

                       gACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCtt                                                                                                                   <  1:675634/133‑1 (MQ=255)

                       gACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCtt                                                                                                                   >  2:675634/1‑133 (MQ=255)

                        aCCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCa                                                                                                            <  1:636521/139‑1 (MQ=255)

                        aCCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCa                                                                                                            <  1:163109/139‑1 (MQ=255)

                            gcgcAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCa                                                                                                            >  1:901618/1‑135 (MQ=255)

                             cgcAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCa                                                                                                       >  1:1051910/1‑139 (MQ=255)

                             cgcAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCa                                                                                                       <  2:743727/139‑1 (MQ=255)

                                  ctgATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAAt                                                                                                  <  2:779283/137‑1 (MQ=255)

                                   ggATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATc                                                                                                 <  2:304695/139‑1 (MQ=255)

                                          cAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCa                                                                                             <  1:213007/136‑1 (MQ=255)

                                          cAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCa                                                                                             <  2:495585/136‑1 (MQ=255)

                                          cAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCAc                                                                                            <  1:258006/137‑1 (MQ=255)

                                          cAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCAc                                                                                            <  1:415768/137‑1 (MQ=255)

                                          cAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCAc                                                                                            <  1:597960/137‑1 (MQ=255)

                                            aCGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCt                                                                                        >  1:591495/1‑139 (MQ=255)

                                              gCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTc                                                                                      <  2:780768/139‑1 (MQ=255)

                                                  caTTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTgcg                                                                                  <  1:1023518/139‑1 (MQ=255)

                                                  caTTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTgcg                                                                                  <  1:940788/139‑1 (MQ=255)

                                                   aTTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTgcgc                                                                                 >  1:717932/1‑139 (MQ=255)

                                                       gCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTTAGAGCATTAATCAGCACGGCTTCTGCGCTGGc                                                                             <  1:1122285/139‑1 (MQ=255)

                                                       gCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGc                                                                             <  2:601553/139‑1 (MQ=255)

                                                       gCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGc                                                                             <  1:579814/139‑1 (MQ=255)

                                                            cATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGc                                                                        <  1:599870/139‑1 (MQ=255)

                                                            cATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGc                                                                        <  2:960246/139‑1 (MQ=255)

                                                            cATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGc                                                                        <  1:495816/139‑1 (MQ=255)

                                                             aTTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCt                                                                       >  1:836967/1‑139 (MQ=255)

                                                                 aCAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCata                                                                   <  2:694803/139‑1 (MQ=255)

                                                                     tAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGcc                                                                                                                               <  1:976331/75‑1 (MQ=255)

                                                                     tAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGcc                                                                                                                               >  2:976331/1‑75 (MQ=255)

                                                                     tAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGc                                                               >  1:58642/1‑139 (MQ=255)

                                                                     tAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGc                                                               >  2:161624/1‑139 (MQ=255)

                                                                               ttCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGt                                                      <  1:636795/138‑1 (MQ=255)

                                                                                 catcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcg                                                   >  1:1141389/1‑139 (MQ=255)

                                                                                  atcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcgg                                                  >  2:346568/1‑139 (MQ=255)

                                                                                  atcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcgg                                                  >  1:696922/1‑139 (MQ=255)

                                                                                  atcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcgg                                                  >  1:477659/1‑139 (MQ=255)

                                                                                  atcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcgg                                                  >  2:65308/1‑139 (MQ=255)

                                                                                   tcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggc                                                 >  2:1054959/1‑139 (MQ=255)

                                                                                   tcaCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggc                                                 >  2:331751/1‑139 (MQ=255)

                                                                                     aCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggcc                                                <  2:1255292/138‑1 (MQ=255)

                                                                                     aCGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggcc                                                <  1:439690/138‑1 (MQ=255)

                                                                                       ggAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCtt                                                                                                                   >  1:788508/1‑69 (MQ=255)

                                                                                       ggAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCtt                                                                                                                   <  2:788508/69‑1 (MQ=255)

                                                                                       ggAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggcccgg                                             >  2:464740/1‑139 (MQ=255)

                                                                                       ggAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAAACAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggcccgg                                             <  2:497963/139‑1 (MQ=255)

                                                                                         aGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggcccggcc                                           >  1:104310/1‑139 (MQ=255)

                                                                                         aGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTcggcccggcc                                           >  2:1284275/1‑139 (MQ=255)

                                                                                             aCTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTa                                        <  2:936762/138‑1 (MQ=255)

                                                                                             aCTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTAc                                       >  1:853218/1‑139 (MQ=255)

                                                                                                 tGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActgg                                    <  2:1141389/138‑1 (MQ=255)

                                                                                                 tGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActgg                                    <  2:586290/138‑1 (MQ=255)

                                                                                                   ttACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGtt                                                     >  2:901956/1‑119 (MQ=255)

                                                                                                   ttACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGtt                                                     <  1:901956/119‑1 (MQ=255)

                                                                                                   ttACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActggctg                                 >  2:932613/1‑139 (MQ=255)

                                                                                                   ttACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActggctg                                 >  1:1018472/1‑139 (MQ=255)

                                                                                                   ttACAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActggct                                  <  2:58642/138‑1 (MQ=255)

                                                                                                     aCAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGc                                                                             <  1:247127/93‑1 (MQ=255)

                                                                                                     aCAGATAGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActggctgg                                <  2:791630/138‑1 (MQ=255)

                                                                                                           aGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTatat                          >  2:610011/1‑138 (MQ=255)

                                                                                                           aGTCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATc                         >  2:945712/1‑139 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCa                                                                                                       >  2:277168/1‑59 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCa                                                                                                       <  1:277168/59‑1 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActg                                     >  1:77698/1‑125 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCAc                       >  2:977102/1‑139 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCAc                       >  1:1285670/1‑139 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCAc                       >  1:293233/1‑139 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCAc                       >  1:370639/1‑139 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTGCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTActg                                     <  2:77698/125‑1 (MQ=255)

                                                                                                             tCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCAc                       >  1:353400/1‑139 (MQ=255)

                                                                                                               ggCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCAcc                      >  2:1168552/1‑138 (MQ=255)

                                                                                                               ggCGCGCTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCg                     <  2:434041/139‑1 (MQ=255)

                                                                                                                 cgcgcTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCata                                                                   >  2:338301/1‑91 (MQ=255)

                                                                                                                 cgcgcTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCata                                                                   <  1:338301/91‑1 (MQ=255)

                                                                                                                   cgcTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCa                                                                                                       >  2:872025/1‑53 (MQ=255)

                                                                                                                   cgcTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACg                 <  1:1168552/139‑1 (MQ=255)

                                                                                                                    gcTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACg                 >  1:1103348/1‑138 (MQ=255)

                                                                                                                     cTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTgcg                                                                                  >  1:1248578/1‑72 (MQ=255)

                                                                                                                     cTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTgcg                                                                                  <  2:1248578/72‑1 (MQ=255)

                                                                                                                     cTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCa               <  1:970154/139‑1 (MQ=255)

                                                                                                                     cTGATCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCa               <  2:477659/139‑1 (MQ=255)

                                                                                                                       gttCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCAt              >  2:693816/3‑138 (MQ=255)

                                                                                                                        aTCCTGCTGATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCAt              <  2:370639/137‑1 (MQ=255)

                                                                                                                              ctgATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTg                                                                >  1:756336/1‑81 (MQ=255)

                                                                                                                              ctgATCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTg                                                                <  2:756336/81‑1 (MQ=255)

                                                                                                                                 aTCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGgttgt   >  1:560994/1‑139 (MQ=255)

                                                                                                                                  tCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACg                 >  1:478808/1‑124 (MQ=255)

                                                                                                                                  tCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACg                 <  2:478808/124‑1 (MQ=255)

                                                                                                                                  tCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGgttgtt  <  2:405501/139‑1 (MQ=255)

                                                                                                                                  tCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGgttgtt  >  2:195406/1‑139 (MQ=255)

                                                                                                                                  tCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGgttgtt  >  1:520060/1‑139 (MQ=255)

                                                                                                                                  tCGCCGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGgttgtt  >  2:282701/1‑139 (MQ=255)

CCGGTCATCATGACCGGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTT  >  NZ_CP009273/2068164‑2068432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`