| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,464,440 | T→C | pseudogene (147/291 nt) | BW25113_RS12275 → | tail fiber assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,464,440 | 0 | T | C | 93.0% | 289.8 / 9.7 | 86 | pseudogene (147/291 nt) | BW25113_RS12275 | tail fiber assembly protein |
| Reads supporting (aligned to +/- strand): ref base T (4/2); new base C (35/45); total (39/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
ACGCCATACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCG > NZ_CP009273/2464309‑2464575 | aCGCCATACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTg < 1:201644/138‑1 (MQ=255) tACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTa > 1:476344/1‑138 (MQ=255) aCGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTa > 1:154448/1‑137 (MQ=255) aTAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGc < 2:109239/139‑1 (MQ=255) aTAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGc < 2:1175148/139‑1 (MQ=255) aaaTGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTg > 1:925561/1‑139 (MQ=255) ggATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCg < 1:292423/138‑1 (MQ=255) aTGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCgg > 2:698737/1‑137 (MQ=255) aTGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCgg > 1:53258/1‑137 (MQ=255) ggTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGc > 2:165721/1‑139 (MQ=255) gTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCt < 2:948185/139‑1 (MQ=255) gaAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATg < 1:447246/139‑1 (MQ=255) gggTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATgcagg > 1:213817/1‑138 (MQ=255) tGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCaga < 2:53258/139‑1 (MQ=255) aCGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAgaga > 1:1192322/1‑139 (MQ=255) cGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGAc > 1:209648/1‑139 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTTGGCGGAAGCTGATGCAGGCAGAGACCTcc < 2:1290563/139‑1 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 1:680995/139‑1 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 1:557830/139‑1 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 2:925561/139‑1 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 2:341716/139‑1 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 2:745858/139‑1 (MQ=255) tACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 1:221970/139‑1 (MQ=255) aCCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTccc > 1:414599/1‑139 (MQ=255) aGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAgg < 2:1126644/102‑1 (MQ=255) aGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAgg > 1:1126644/1‑102 (MQ=255) gCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 1:407169/132‑1 (MQ=255) gCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc > 2:407169/1‑132 (MQ=255) gCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACtt > 1:1211342/1‑138 (MQ=255) caGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 2:770892/139‑1 (MQ=255) caGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 2:476344/139‑1 (MQ=255) caGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 2:328787/139‑1 (MQ=255) caGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 2:279929/139‑1 (MQ=255) caGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 1:698737/139‑1 (MQ=255) aGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAacac > 2:667925/1‑139 (MQ=255) tAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACtgtg < 1:1101509/139‑1 (MQ=255) tAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACtgtg < 1:805912/139‑1 (MQ=255) gCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGc < 1:165721/138‑1 (MQ=255) cGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTg > 2:440802/1‑139 (MQ=255) tCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGa < 2:154604/139‑1 (MQ=255) cGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc > 2:645991/1‑118 (MQ=255) cGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 1:645991/118‑1 (MQ=255) cAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc > 2:72163/1‑116 (MQ=255) cAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 1:72163/116‑1 (MQ=255) cAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACtg > 1:8095/1‑129 (MQ=255) cAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACtg < 2:8095/129‑1 (MQ=255) gcagAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCgg > 2:764370/1‑139 (MQ=255) gcagAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCgg > 1:4925/1‑139 (MQ=255) cagAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGt < 2:159012/139‑1 (MQ=255) gCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc > 1:1163649/1‑99 (MQ=255) gCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTcc < 2:1163649/99‑1 (MQ=255) gCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACgg > 1:836742/1‑139 (MQ=255) gcgcCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCaa > 1:1227680/1‑137 (MQ=255) gcgcCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACa < 1:201513/139‑1 (MQ=255) gcgcCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACa < 1:667925/139‑1 (MQ=255) gcgcCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACa < 2:139526/139‑1 (MQ=255) gcgcCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACa < 2:829127/139‑1 (MQ=255) gTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATAc > 1:858911/1‑138 (MQ=255) tCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCACGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATAc > 1:921631/1‑137 (MQ=255) atACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTaa < 1:796726/85‑1 (MQ=255) atACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTaa > 2:796726/1‑85 (MQ=255) atACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCgcgc < 2:836742/138‑1 (MQ=255) atACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCgcgc < 2:858911/138‑1 (MQ=255) atACTGCAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGcc > 2:660389/1‑139 (MQ=255) cAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCagag < 2:695415/65‑1 (MQ=255) cAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCagag > 1:695415/1‑65 (MQ=255) cAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCaga > 1:376726/1‑64 (MQ=255) cAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCaga < 2:376726/64‑1 (MQ=255) cAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGt > 2:541377/1‑139 (MQ=255) cAATGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGt > 2:822940/1‑139 (MQ=255) aTGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 1:272765/79‑1 (MQ=255) aTGGCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca > 2:272765/1‑79 (MQ=255) gCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACt > 2:990076/1‑71 (MQ=255) gCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACt < 1:990076/71‑1 (MQ=255) gCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTaa < 2:446507/74‑1 (MQ=255) gCTTCCATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTaa > 1:446507/1‑74 (MQ=255) cATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACgg > 1:848407/1‑101 (MQ=255) cATTAGTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACgg < 2:848407/101‑1 (MQ=255) gTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTaa < 2:76597/64‑1 (MQ=255) gTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTaa > 1:76597/1‑64 (MQ=255) gTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca < 2:553294/66‑1 (MQ=255) gTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAaca > 1:553294/1‑66 (MQ=255) gTCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAAc < 2:742410/138‑1 (MQ=255) tCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGc > 2:1101914/1‑96 (MQ=255) tCTGATCCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGc < 1:1101914/96‑1 (MQ=255) aTTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCg > 1:992066/1‑138 (MQ=255) | ACGCCATACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCG > NZ_CP009273/2464309‑2464575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |