| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,897,407 | A→C | intergenic (+674/+699) | ygcE → / ← queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,897,407 | 0 | A | C | 97.4% | 276.9 / ‑2.5 | 77 | intergenic (+674/+699) | ygcE/queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (41/34); total (42/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
TGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAG > NZ_CP009273/2897274‑2897541 | tGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGcc > 1:591282/1‑139 (MQ=255) gagaACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCt > 2:761816/1‑138 (MQ=255) gagaACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCt > 2:642461/1‑138 (MQ=255) gagaACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCt > 1:906516/1‑138 (MQ=255) gagaACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCt > 2:1122799/1‑138 (MQ=255) cTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCagtag < 1:421971/139‑1 (MQ=255) tGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGt > 2:72567/1‑139 (MQ=255) aTGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGc < 1:284040/139‑1 (MQ=255) gAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCt < 2:353075/138‑1 (MQ=255) gAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCt > 1:353075/1‑138 (MQ=255) gAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTc > 1:720902/1‑139 (MQ=255) aGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTc < 2:803809/138‑1 (MQ=255) gtTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGtt > 2:328541/1‑139 (MQ=255) cGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATc > 2:316159/1‑139 (MQ=255) tGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATccc > 1:1000131/1‑139 (MQ=255) gATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTc < 2:199983/120‑1 (MQ=255) gATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTc > 1:199983/1‑120 (MQ=255) atatGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGc > 2:1157591/1‑139 (MQ=255) atGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTg > 1:393317/1‑139 (MQ=255) ttGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGgc < 1:316159/138‑1 (MQ=255) gCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGcgcg > 2:64513/1‑139 (MQ=255) cTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGcgcg < 1:1157591/138‑1 (MQ=255) tattaCAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCggg > 1:1100627/1‑138 (MQ=255) taCAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGaa > 1:739559/1‑138 (MQ=255) gTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTg > 2:522651/1‑139 (MQ=255) tACTGTTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGt < 2:591282/139‑1 (MQ=255) tGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGtc > 2:772267/1‑92 (MQ=255) tGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGtc < 1:772267/92‑1 (MQ=255) tGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGtttt > 2:1283639/1‑139 (MQ=255) gCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGgcg > 2:437617/1‑121 (MQ=255) gCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGgcg < 1:437617/121‑1 (MQ=255) gCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTc > 1:685250/1‑139 (MQ=255) cTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCg > 1:444580/1‑139 (MQ=255) cTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCg < 2:1063778/139‑1 (MQ=255) cTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCg > 1:261394/1‑139 (MQ=255) atatAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa < 1:1122799/138‑1 (MQ=255) atatAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTCTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCaa < 2:1000131/139‑1 (MQ=255) tataAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCaaa > 2:1111579/1‑139 (MQ=255) ataAAAACTTGAGAAAGAGATGAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAAt > 2:1276739/1‑139 (MQ=255) ataAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAAt > 2:696533/1‑139 (MQ=255) aaaaCTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTa < 1:1111579/139‑1 (MQ=255) cTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGa < 2:739559/139‑1 (MQ=255) ttGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTa > 1:633838/1‑134 (MQ=255) ttGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTa < 2:633838/134‑1 (MQ=255) agaAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTAt < 1:642461/139‑1 (MQ=255) agaTAACGGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTa < 2:420731/139‑1 (MQ=255) gaTAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTAtt < 2:444580/139‑1 (MQ=255) ttATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTAt > 1:1155996/1‑123 (MQ=255) ttATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTAt < 2:1155996/123‑1 (MQ=255) ttATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATc > 2:215752/1‑139 (MQ=255) tataTGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGc > 2:474664/1‑82 (MQ=255) tataTGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGc < 1:474664/82‑1 (MQ=255) tggtggTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCg < 2:1046810/138‑1 (MQ=255) gtggtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTg > 1:1261607/1‑139 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGtc > 2:651977/1‑48 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGtc < 1:651977/48‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCgggg > 2:495870/1‑83 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCgggg < 1:495870/83‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTg > 2:240632/1‑115 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTg < 1:240632/115‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGgcg > 1:716850/1‑139 (MQ=255) tATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCgg > 2:243943/1‑139 (MQ=255) tCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa > 1:781970/1‑94 (MQ=255) tCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa < 2:781970/94‑1 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTAtt < 1:196328/110‑1 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTAtt > 2:196328/1‑110 (MQ=255) gcgcGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGgc < 1:1127802/139‑1 (MQ=255) cgcgGGGAACTCGACAGACCGGCCTCAGTAGTATCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGgcg > 1:1108396/1‑139 (MQ=255) cgGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCa < 2:393317/139‑1 (MQ=255) cgGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCa < 1:696533/139‑1 (MQ=255) cgGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTGCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCa < 2:229656/139‑1 (MQ=255) gggAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGc > 1:318020/1‑38 (MQ=255) gggAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGc < 2:318020/38‑1 (MQ=255) gggAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACg < 1:522651/139‑1 (MQ=255) cAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa < 2:1214869/70‑1 (MQ=255) cAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa > 1:1214869/1‑70 (MQ=255) cAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAg < 1:328541/139‑1 (MQ=255) | TGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAAC‑GGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAG > NZ_CP009273/2897274‑2897541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |