| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,919,491 | A→G | D262G (GAC→GGC) | queF → | NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase QueF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,919,491 | 0 | A | G | 95.4% | 372.7 / 6.2 | 108 | D262G (GAC→GGC) | queF | NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase QueF |
| Reads supporting (aligned to +/- strand): ref base A (2/3); new base G (52/51); total (54/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTG > NZ_CP009273/2919365‑2919623 | tctcATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCg < 2:438287/137‑1 (MQ=255)tctcATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCg > 1:438287/1‑137 (MQ=255)tctcATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTg > 2:489271/1‑139 (MQ=255) aTTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTgg < 2:1101642/136‑1 (MQ=255) aTTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg < 1:1219142/138‑1 (MQ=255) aTTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg < 1:1279789/138‑1 (MQ=255) ttCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg > 2:613858/1‑137 (MQ=255) ttCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg > 1:575517/1‑137 (MQ=255) tcatcaCAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTaa > 2:1046712/1‑138 (MQ=255) tcatcaCAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTaa > 2:840961/1‑138 (MQ=255) atcaCAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAg < 2:1000897/139‑1 (MQ=255) atcaCAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAg < 1:762235/139‑1 (MQ=255) aaCGAGTTCCACGAACAGCGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGAGGCGGCCCTGGCTTTAACCCGTGGCGCATCAATAGCGttt > 2:343738/1‑139 (MQ=255) aCGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATc < 1:1015695/139‑1 (MQ=255) aCGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATc < 2:162407/139‑1 (MQ=255) aCGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATc < 1:514499/139‑1 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg < 2:88263/107‑1 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg > 1:88263/1‑107 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgc > 1:903062/1‑106 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgc < 2:903062/106‑1 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTc > 2:545311/1‑126 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTc < 1:545311/126‑1 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCa > 1:66048/1‑129 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCa < 2:66048/129‑1 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACcaca > 2:1039887/1‑138 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACcac > 2:1105702/1‑137 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACcac > 1:759487/1‑137 (MQ=255) tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACcac > 1:261951/1‑137 (MQ=255) cGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAg < 2:575517/138‑1 (MQ=255) gTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACa > 2:742178/1‑91 (MQ=255) gTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACa < 1:742178/91‑1 (MQ=255) tGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACt > 1:519785/1‑139 (MQ=255) aCGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGtt < 1:219856/139‑1 (MQ=255) aCGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGtt > 1:1194020/1‑139 (MQ=255) gCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg < 2:713123/97‑1 (MQ=255) gCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg > 1:713123/1‑97 (MQ=255) gCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACcac < 2:907633/127‑1 (MQ=255) gCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGACTGGGCTTTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACcac > 1:907633/1‑127 (MQ=255) aTCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTgg < 1:908577/93‑1 (MQ=255) aTCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTgg > 2:908577/1‑93 (MQ=255) aTCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCgg > 1:907204/1‑138 (MQ=255) cTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGgcg > 2:562371/1‑93 (MQ=255) cTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGgcg < 1:562371/93‑1 (MQ=255) tAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACca < 1:648856/119‑1 (MQ=255) tAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACca > 2:648856/1‑119 (MQ=255) cTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAAtttttt > 2:470921/1‑139 (MQ=255) cTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAAtttttt > 1:878775/1‑139 (MQ=255) cTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAAtttttt > 1:1190567/1‑139 (MQ=255) cTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAAtttttt > 1:904321/1‑139 (MQ=255) gTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTtct > 1:878129/1‑139 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg < 2:727044/80‑1 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGgcg > 1:727044/1‑80 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTtct < 1:178998/138‑1 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTtct > 2:857449/1‑138 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTtct > 2:1103191/1‑138 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTtc < 2:600039/137‑1 (MQ=255) ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAAACTGGTTCGGCAATAAATTTTTtct > 1:44849/1‑138 (MQ=255) gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTTTGGGCATTAACCCGCTGCGCAGTAATAACGATTTTCGCCCATTGCCCACAAGACCTGGTCGGCAATAAATTTTTTCTCAATTTTTCGt > 2:559178/1‑139 (MQ=255) gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTTCgc > 2:1237359/1‑138 (MQ=255) gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGt > 2:1173303/1‑139 (MQ=255) gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGt > 2:1240756/1‑139 (MQ=255) ccagccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGc < 1:72835/136‑1 (MQ=255) gAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAg < 2:406527/138‑1 (MQ=255) gAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAg < 2:907204/138‑1 (MQ=255) aGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGa < 2:1194020/138‑1 (MQ=255) aGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGa < 1:798736/138‑1 (MQ=255) aGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGa < 2:283907/138‑1 (MQ=255) cGCACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCCTCGACCACAAGACTGGTTCGGCAATAAGTTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTtgtg < 1:500076/138‑1 (MQ=255) cACGTTATACCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGaaa < 2:594759/139‑1 (MQ=255) tataCCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtca > 1:918938/1‑139 (MQ=255) taCCCGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat < 2:759487/138‑1 (MQ=255) cccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcatca < 1:898795/138‑1 (MQ=255) ccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg < 1:1173303/139‑1 (MQ=255) ccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg < 2:1190567/139‑1 (MQ=255) ccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg < 1:1046712/139‑1 (MQ=255) ccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg < 1:1039887/139‑1 (MQ=255) ccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg < 2:904321/139‑1 (MQ=255) ccGTCGTGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg < 2:878775/139‑1 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATc > 2:296245/1‑54 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATc < 1:296245/54‑1 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATc < 1:1272062/54‑1 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGAtt > 1:1035209/1‑107 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGAtt < 2:1035209/107‑1 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAg > 1:130319/1‑117 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAg < 2:130319/117‑1 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcaggcag > 1:819316/1‑139 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcaggcag > 2:924869/1‑139 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcaggcag > 1:501503/1‑139 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcaggcag > 2:349822/1‑139 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGTGGCGCAGGAATAACGATTTTGTCCCATCGACCACAAGACTGGGTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGGAGGTTGTGAAAGGGCATcaggcag > 2:134072/1‑139 (MQ=255) tcgtGGCGGTCTGGGCATTAACCCGGGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCCATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcaggcag > 1:24323/1‑139 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAAttt > 1:88348/1‑92 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAAttt < 2:88348/92‑1 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAggg < 1:857449/139‑1 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAggg < 1:616815/139‑1 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAggg < 2:1170871/139‑1 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAggg > 1:115099/1‑139 (MQ=255) gtGGCGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAggg < 1:1105702/139‑1 (MQ=255) cGGTCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTAt < 2:819316/139‑1 (MQ=255) tCTGGGCATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTg > 2:257157/1‑138 (MQ=255) | TCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTG > NZ_CP009273/2919365‑2919623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |