Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 3,312,159 C→T A55V (GCG→GTG)  argG → argininosuccinate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092733,312,1590CT93.2% 241.3 / 5.9 73A55V (GCG→GTG) argGargininosuccinate synthase
Reads supporting (aligned to +/- strand):  ref base C (3/2);  new base T (38/30);  total (41/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01

GTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCC  >  NZ_CP009273/3312027‑3312284
                                                                                                                                    |                                                                                                                             
gTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATccc                                                                                                                         >  1:1246217/1‑139 (MQ=255)
gTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATccc                                                                                                                         >  1:875054/1‑139 (MQ=255)
   aaCGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCtcg                                                                                                                      <  2:875054/139‑1 (MQ=255)
         tttgTATCGCTTTCTCTGGCGGTCTGGACACCAGTGCCGCTCTGCTGTGGATGCGACAAAAGGGGGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 <  2:1133343/135‑1 (MQ=255)
         ttGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 <  1:957392/138‑1 (MQ=255)
         ttGGTATCGCTTTTTCTGGCGGTCTGGACACCGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGcc                                                                                                               <  2:771701/139‑1 (MQ=255)
          tGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCACGTCGTGc                                                                                                                >  2:816153/1‑138 (MQ=255)
               tCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATgg                                                                                                           >  2:58165/1‑138 (MQ=255)
               tCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATgg                                                                                                           >  1:330942/1‑138 (MQ=255)
                 gCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 <  2:393171/130‑1 (MQ=255)
                 gCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 >  1:393171/1‑130 (MQ=255)
                  cTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATa                                                                                                       <  1:308592/139‑1 (MQ=255)
                      ttCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGgc                                                                                                   >  2:1272288/1‑139 (MQ=255)
                           gCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGga                                                                                              <  2:1246217/139‑1 (MQ=255)
                                   gACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         <  1:1272288/136‑1 (MQ=255)
                                   gACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         <  1:518308/136‑1 (MQ=255)
                                   gACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCAc                                                                                      <  2:906673/139‑1 (MQ=255)
                                        cAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCt                                                                                  >  1:454822/1‑138 (MQ=255)
                                           tGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATc                                                                              >  2:272156/1‑139 (MQ=255)
                                           tGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATc                                                                              >  1:739056/1‑139 (MQ=255)
                                               gCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         <  2:988642/124‑1 (MQ=255)
                                               gCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         >  1:988642/1‑124 (MQ=255)
                                                cACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTg                                                                         >  2:385935/1‑139 (MQ=255)
                                                     ctgTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCa                                                                    <  1:760974/139‑1 (MQ=255)
                                                              cGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACtgg                                                           <  2:454822/139‑1 (MQ=255)
                                                               gACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCtcg                                                                                                                      >  2:333877/1‑79 (MQ=255)
                                                               gACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCtcg                                                                                                                      <  1:333877/79‑1 (MQ=255)
                                                               gACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACtggt                                                          >  2:528538/1‑139 (MQ=255)
                                                               gACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACtggt                                                          >  1:280108/1‑139 (MQ=255)
                                                               gACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACtggt                                                          <  1:452490/139‑1 (MQ=255)
                                                               gACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACtggt                                                          >  2:240628/1‑139 (MQ=255)
                                                                         aGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAgg                                                 >  2:249718/1‑138 (MQ=255)
                                                                           cGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTAt                                              >  2:16024/1‑139 (MQ=255)
                                                                              ttCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGc                                           >  1:493415/1‑139 (MQ=255)
                                                                                 cTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCg                                         <  1:816153/138‑1 (MQ=255)
                                                                                        atatACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGACGGTATTGCCGCTATTCAg                                 >  2:796668/1‑139 (MQ=255)
                                                                                        atatACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAg                                 >  2:73607/1‑139 (MQ=255)
                                                                                          ataCTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGACGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAgtg                               >  1:278507/1‑139 (MQ=255)
                                                                                              tGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgc                           >  2:296144/1‑139 (MQ=255)
                                                                                               gCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         >  1:421777/1‑76 (MQ=255)
                                                                                               gCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         <  2:421777/76‑1 (MQ=255)
                                                                                               gCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         >  1:824302/1‑76 (MQ=255)
                                                                                               gCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACg                                                                                         <  2:824302/76‑1 (MQ=255)
                                                                                               gCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          >  2:980832/1‑139 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCtcgtc                                                                                                                    <  1:603535/48‑1 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCtcgtc                                                                                                                    >  2:603535/1‑48 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 <  2:169164/51‑1 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 >  1:169164/1‑51 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          >  1:791582/1‑138 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          <  1:150947/138‑1 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          >  2:1030528/1‑138 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          >  2:1101001/1‑138 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          <  2:280108/138‑1 (MQ=255)
                                                                                                cAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          >  2:925992/1‑138 (MQ=255)
                                                                                                 aaaCCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 <  2:372156/50‑1 (MQ=255)
                                                                                                 aaaCCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTg                                                                                                                 >  1:372156/1‑50 (MQ=255)
                                                                                                 aaaCCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCa                        <  1:296144/139‑1 (MQ=255)
                                                                                                 aaaCCTGGGCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCa                        <  1:805125/139‑1 (MQ=255)
                                                                                                     cTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCAttt                     >  1:990200/1‑138 (MQ=255)
                                                                                                        ggCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCg                                         >  1:648349/1‑115 (MQ=255)
                                                                                                        ggCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCg                                         <  2:648349/115‑1 (MQ=255)
                                                                                                        ggCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          <  1:1009435/130‑1 (MQ=255)
                                                                                                        ggCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGgcg                          >  2:1009435/1‑130 (MQ=255)
                                                                                                        ggCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCa                        >  2:315556/1‑132 (MQ=255)
                                                                                                        ggCCAGCCAGACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCa                        <  1:315556/132‑1 (MQ=255)
                                                                                                            agccagACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAacac             <  1:460349/139‑1 (MQ=255)
                                                                                                             gccagACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCg                                         >  2:557342/1‑110 (MQ=255)
                                                                                                             gccagACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCg                                         <  1:557342/110‑1 (MQ=255)
                                                                                                             gccagACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAacac             >  1:1289153/1‑138 (MQ=255)
                                                                                                             gccagACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAacac             >  1:484494/1‑138 (MQ=255)
                                                                                                                 gACGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACcg        <  2:484494/139‑1 (MQ=255)
                                                                                                                  aCGAAGAGGATTATGATGTGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACcgg       >  2:867723/1‑139 (MQ=255)
                                                                                                                       gagGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGcc  <  1:240628/139‑1 (MQ=255)
                                                                                                                                    |                                                                                                                             
GTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCC  >  NZ_CP009273/3312027‑3312284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: