Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	251,770	T→C	E145G (GAA→GGA)	pepD ←	cytosol nonspecific dipeptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	251,770	0	T	C	100.0%	270.5 / NA	77	E145G (GAA→GGA)	pepD	cytosol nonspecific dipeptidase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/36);  total (41/36)

AGGTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTTCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAT  >  NZ_CP009273/251635‑251902                                                                                                                                        |                                                                                                                                     aGGTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCgg                                                                                                                                   <  2:697661/139‑1 (MQ=255)  ggTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGt                                                                                                                                  >  1:164665/1‑139 (MQ=255)  ggTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGt                                                                                                                                  >  2:810805/1‑139 (MQ=255)  ggTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGt                                                                                                                                  >  2:172145/1‑139 (MQ=255)  ggTTGGAGGTGAAGACGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTACGCCGAACGCACCGTCCATACCGGCTTCTCCgg                                                                                                                                   >  2:319704/1‑138 (MQ=255)   gTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGt                                                                                                                                  >  1:1111798/1‑138 (MQ=255)   gTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTc                                                                                                                                 <  1:839741/139‑1 (MQ=255)   gTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTc                                                                                                                                 <  2:886525/139‑1 (MQ=255)             aaGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTcag                                                                                                                         >  1:764181/1‑137 (MQ=255)              aGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTcagcag                                                                                                                      <  2:82925/139‑1 (MQ=255)                        ccccGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGc                                                                                                            <  2:1264239/139‑1 (MQ=255)                          ccGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCgg                                                                                                          >  1:1168283/1‑139 (MQ=255)                            gCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGc                                                                                                        >  1:109162/1‑139 (MQ=255)                                 aCCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTg                                                                                                    >  2:854242/1‑138 (MQ=255)                                  cccATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGaa                                                                                                  <  1:216884/139‑1 (MQ=255)                                     aTGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCa                                                                                               >  2:188028/1‑139 (MQ=255)                                       gTAGATTTCACCTTCTTCTTCGGAGTTGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTc                                                                                                                                 <  1:875228/103‑1 (MQ=255)                                       gTAGATTTCACCTTCTTCTTCGGAGTTGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTc                                                                                                                                 >  2:875228/1‑103 (MQ=255)                                            tttCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGc                                                                                                            <  2:559044/119‑1 (MQ=255)                                            tttCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGc                                                                                                            >  1:559044/1‑119 (MQ=255)                                            tttCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAAcc                                                                                                >  2:27068/1‑131 (MQ=255)                                            tttCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAAcc                                                                                                <  1:27068/131‑1 (MQ=255)                                            tttCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTc                                                                                        >  1:647975/1‑139 (MQ=255)                                             ttCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCg                                                                                       >  2:399702/1‑139 (MQ=255)                                               cACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGCACCACGTTTTCGt                                                                                      >  1:830591/1‑138 (MQ=255)                                               cACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGt                                                                                      <  1:350534/138‑1 (MQ=255)                                                       tcttcGGAGTCGGTGTTAATCAAAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCCCCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGa                                                                              <  1:425617/138‑1 (MQ=255)                                                           cGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGc                                                                         >  2:1015306/1‑139 (MQ=255)                                                             gggtgggTGTTAACCAGAATATCAGCCTGCACCCAGTTGCCCTGTAAGCCGACCGCACCGTCCATCCCGGCTTCCCCGGTCAGGGTCAGCAGCCCTCCCAGCGGGCCGTGAACCACTTTTTCGTCAGCCAGAACCGCCa                                                                       <  2:1062629/134‑1 (MQ=255)                                                              aGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAg                                                                      >  2:1112875/1‑139 (MQ=255)                                                                tCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAgcg                                                                    >  2:14486/1‑139 (MQ=255)                                                                  gtgttgaaTCAGAATATCCGCCTGCAACCAGTGGCCCTGTACGCCAAACGCACCGTCCATCCCGGCTTCTCCGGTCATGTACAGCACCACTCCCAGCGGGCCTTGACCCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  <  2:1160388/133‑1 (MQ=255)                                                                  ggTTTTAATCAGAATATCAGCCTGCAACCAGTGGCCCTGTAAGCCGACCCCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCACCACTTCCAGCGGGCCGTGAACCACGTTTTCGCCAGCCAGAACCGCCAGCGCa                                                                  <  1:733597/139‑1 (MQ=255)                                                                  ggTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  <  2:145319/139‑1 (MQ=255)                                                                  ggTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  <  1:172145/139‑1 (MQ=255)                                                                  ggTGTTAACCAGAATACCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCCCCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTCCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  <  2:842613/139‑1 (MQ=255)                                                                   gtgtTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAgcg                                                                    >  1:631823/1‑136 (MQ=255)                                                                     gtTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCagag                                                               >  2:171846/1‑139 (MQ=255)                                                                        aaTCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCAGGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGc                                                             <  2:109162/138‑1 (MQ=255)                                                                              aaTATCAGCCTGCAACCAGTTGCCTTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  <  1:1055197/127‑1 (MQ=255)                                                                              aaTATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  >  2:1055197/1‑127 (MQ=255)                                                                              aaTATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATAcc                                                       >  2:1239226/1‑138 (MQ=255)                                                                              aaTATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATAcc                                                       >  2:1032122/1‑138 (MQ=255)                                                                               atatCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCaa                                                     <  1:188028/139‑1 (MQ=255)                                                                                   cAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCCGAGGCCATACCAATGcc                                                 >  2:193450/1‑139 (MQ=255)                                                                                   cAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGcc                                                 <  1:1112875/139‑1 (MQ=255)                                                                                     gCCGGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGt                                               <  1:171846/139‑1 (MQ=255)                                                                                      ccTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGt                                               >  1:766965/1‑138 (MQ=255)                                                                                        tGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGc                                                                                                            >  2:892385/1‑75 (MQ=255)                                                                                        tGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGc                                                                                                            <  1:892385/75‑1 (MQ=255)                                                                                        tGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTAt                                            >  2:23546/1‑139 (MQ=255)                                                                                          cAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCg                                                                                       >  1:67809/1‑94 (MQ=255)                                                                                          cAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCg                                                                                       <  2:67809/94‑1 (MQ=255)                                                                                               aGTTGCCCTGTAAGCCGAACGCCCCGTCCATCCCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     <  1:1025164/139‑1 (MQ=255)                                                                                               aGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCCCCGGTCATGGTCAGCAGCCCTCCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     <  1:295114/139‑1 (MQ=255)                                                                                                gTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     >  1:809811/1‑138 (MQ=255)                                                                                                       tGTAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCgtgg                             >  2:24499/1‑139 (MQ=255)                                                                                                         tAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCgtggtg                           >  2:1019197/1‑139 (MQ=255)                                                                                                         tAAGCCGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCgtggtg                           >  2:1264970/1‑139 (MQ=255)                                                                                                              cGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAg                                                                                   >  1:1251569/1‑78 (MQ=255)                                                                                                              cGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAg                                                                                   <  2:1251569/78‑1 (MQ=255)                                                                                                              cGAACGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCcgcg                      <  1:854242/139‑1 (MQ=255)                                                                                                              cGAACGCACCGTCAATACCGGCTTCTCCGGTCATGGTCAGCAGCACTCCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCcgcg                      <  1:797617/139‑1 (MQ=255)                                                                                                                aaCGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCcgcgcg                    >  2:655106/1‑139 (MQ=255)                                                                                                                  cGCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCt                  >  1:1151149/1‑139 (MQ=255)                                                                                                                   gCACCGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCtt                 >  1:481091/1‑139 (MQ=255)                                                                                                                       cGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAAc             >  1:1964/1‑139 (MQ=255)                                                                                                                       cGTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAAc             >  2:730154/1‑139 (MQ=255)                                                                                                                        gTCCATACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAAcc            >  1:52232/1‑139 (MQ=255)                                                                                                                             tACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     >  2:970750/1‑109 (MQ=255)                                                                                                                             tACCGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     <  1:970750/109‑1 (MQ=255)                                                                                                                                cGGCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGcc    <  1:24499/139‑1 (MQ=255)                                                                                                                                  gCTTCTCCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAt  <  2:1023084/139‑1 (MQ=255)                                                                                                                                  gCTTCGCCGGTCATGGTCAGCAGCACTCCCAGCGGGCCGTGAACCACTTTTTCGCCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAt  <  2:647975/139‑1 (MQ=255)                                                                                                                                  gCTTCCCCGTTCATGGCCAGCAGCCCTTCCAGCGGCCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAt  <  2:528702/139‑1 (MQ=255)                                                                                                                                  gCTTCCCCGGTCATGGTCAGCAGCCCTCCCAGCGGGCCGGGAACCACGTTTTCGTCAGCCAAAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAt  <  2:542527/139‑1 (MQ=255)                                                                                                                                  gCTCCTCCGGTCATGGCCACCAGCACTCCCAGCGGGCCGTGACCCCCGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAt  <  2:52232/139‑1 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGc                                                                         <  2:1088690/67‑1 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGc                                                                         >  1:1088690/1‑67 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  >  1:1271324/1‑74 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     >  2:305857/1‑103 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCAcc                                     <  1:305857/103‑1 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCcgcg                      >  2:256497/1‑118 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCcgcg                      <  1:256497/118‑1 (MQ=255)                                                                                                                                   cttctcCGGTCATGGTCAGCAGCACTCCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCa                                                                  <  2:1271324/74‑1 (MQ=255)                                                                                                                                        |                                                                                                                                     AGGTTGGAGGTGAAGTCGATACCCCCCGCACAACCCATGTAGATTTCACCTTCTTCTTCGGAGTCGGTGTTAATCAGAATATCAGCCTGCAACCAGTTGCCCTGTAAGCCGAACGCACCGTCCATACCGGCTTCTTCGGTCATGGTCAGCAGCACTTCCAGCGGGCCGTGAACCACGTTTTCGTCAGCCAGAACCGCCAGCGCAGAGGCCATACCAATGCCGTTATCCGCACCCAGCGTGGTGCCGCGCGCTTTAACCCATTCGCCAT  >  NZ_CP009273/251635‑251902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑