| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,637,299 | T→C | E415G (GAA→GGA) | prlC ← | oligopeptidase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,637,299 | 0 | T | C | 96.1% | 347.1 / 4.3 | 103 | E415G (GAA→GGA) | prlC | oligopeptidase A |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base C (41/58); total (42/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AGTGAACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTTCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTAAATACGCTTAA > NZ_CP009273/3637163‑3637434 | agtgaACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGACCCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCa < 2:729166/139‑1 (MQ=255)agtgaACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTTCa < 2:441131/139‑1 (MQ=255)agtgaACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCa < 1:848294/139‑1 (MQ=255) tgaACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCGCGCCCCGCCGCGCTTGTTTCCACg < 2:170445/139‑1 (MQ=255) tgaACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACg < 1:266618/139‑1 (MQ=255) tgaACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATACACGCCCCGCCGCGCTTGTTTCCACg < 1:170273/139‑1 (MQ=255) gcgcCGGTTTCCCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCGTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa < 2:8546/139‑1 (MQ=255) cgcCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa > 1:460170/1‑138 (MQ=255) cgcCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa > 2:957803/1‑138 (MQ=255) ccGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCa < 2:1007111/128‑1 (MQ=255) ccGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCa > 1:1007111/1‑128 (MQ=255) cGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa > 2:838138/1‑135 (MQ=255) ggTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt < 2:869960/139‑1 (MQ=255) ggTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt < 2:1002049/139‑1 (MQ=255) ggTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt < 2:328133/139‑1 (MQ=255) ggTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt < 2:538216/139‑1 (MQ=255) ggTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt < 2:661520/139‑1 (MQ=255) gTTTACCATTTACCGGGCGGTTGAAGTTACAACTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa > 1:1117049/1‑133 (MQ=255) aCCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAg < 1:724708/138‑1 (MQ=255) tttACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTTCACGGGCATACAGATCGAGGTAGa < 2:416944/139‑1 (MQ=255) tttACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAg > 1:474853/1‑138 (MQ=255) ttACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAg > 1:456219/1‑137 (MQ=255) cGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTa < 2:76710/139‑1 (MQ=255) ggCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTAcc > 1:919598/1‑139 (MQ=255) ggCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTAcc > 2:1226135/1‑139 (MQ=255) gCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCa > 1:1072249/1‑109 (MQ=255) gCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCa < 2:1072249/109‑1 (MQ=255) ttGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCa < 2:474853/139‑1 (MQ=255) aCAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTa > 2:576003/1‑139 (MQ=255) aCAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTa > 1:83837/1‑139 (MQ=255) cAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTAt < 2:162212/139‑1 (MQ=255) cAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTAt < 1:838138/139‑1 (MQ=255) aaTACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt > 1:536535/1‑102 (MQ=255) aaTACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGAt < 2:536535/102‑1 (MQ=255) cgACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAg > 2:457990/1‑139 (MQ=255) gACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGt > 2:108449/1‑139 (MQ=255) ccGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTc > 2:567487/1‑139 (MQ=255) gTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCg > 1:903945/1‑137 (MQ=255) tttttGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCgaag < 1:1012434/139‑1 (MQ=255) tttGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCgaaga < 2:669091/138‑1 (MQ=255) aaGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTa > 1:259870/1‑138 (MQ=255) cTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCa < 1:108449/139‑1 (MQ=255) cTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCa < 2:51404/139‑1 (MQ=255) tttACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTTCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGc > 2:472817/1‑136 (MQ=255) tACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACcgcg < 2:205676/85‑1 (MQ=255) tACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAg < 2:456219/137‑1 (MQ=255) aCGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATa < 2:404321/105‑1 (MQ=255) aCGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATa > 1:404321/1‑105 (MQ=255) cGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACAt > 1:787053/1‑139 (MQ=255) gCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATc < 1:1239537/139‑1 (MQ=255) aTCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCaa < 1:1192719/139‑1 (MQ=255) cTGGCCTACGCATTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACg < 1:330416/48‑1 (MQ=255) cTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACg > 2:330416/1‑48 (MQ=255) cTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCg < 1:167249/122‑1 (MQ=255) cTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCg > 2:167249/1‑122 (MQ=255) cTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACa > 1:12446/1‑139 (MQ=255) cTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACa > 1:134394/1‑139 (MQ=255) gCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa < 2:1180577/51‑1 (MQ=255) gCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATa > 1:1180577/1‑51 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTTCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 1:472817/139‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCTACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 1:764810/139‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCg < 1:1053246/53‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCg > 2:1053246/1‑53 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGCGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTCACg > 1:942992/1‑139 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTAttt > 2:180706/1‑83 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTAttt < 1:180706/83‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTAt < 1:125430/81‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTAt > 2:125430/1‑81 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCa < 1:1141017/121‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCa > 2:1141017/1‑121 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTa < 2:569532/137‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTa < 2:903945/137‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 2:296889/139‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 2:919598/139‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 2:893542/139‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg > 2:196109/1‑139 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 2:787053/139‑1 (MQ=255) cGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 1:196109/139‑1 (MQ=255) cGCAGTCACCCATCCACGCCCCGCCGCGCTTGTTTCCTCTGGCATTCAGATCGAGGTAGAAGCTACCGCTCAGTTCGTTATTTTCGTCATTCAGTTCGAAGAAACGTACAACCGGATGCCAGACATCAACAGCTTTACg < 2:942992/139‑1 (MQ=255) tCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCa > 2:736374/1‑116 (MQ=255) tCATCCATCCACGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCtt > 2:287512/1‑139 (MQ=255) caCGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGa < 2:134394/139‑1 (MQ=255) aCGCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 1:287883/124‑1 (MQ=255) aCGCCCCGCCGCGCTTGTTTCAACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg > 2:287883/1‑124 (MQ=255) gCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg > 1:706837/1‑122 (MQ=255) gCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACg < 2:706837/122‑1 (MQ=255) gCCCCGCCGCGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGc < 1:957803/139‑1 (MQ=255) gccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGc < 1:709952/134‑1 (MQ=255) gccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGc > 2:709952/1‑134 (MQ=255) gccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTaa < 1:457990/139‑1 (MQ=255) gccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTaa < 2:259870/139‑1 (MQ=255) gccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTa > 1:404846/1‑138 (MQ=255) ccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTaaa < 2:460170/139‑1 (MQ=255) ccgcGCTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTaaa > 1:428904/1‑139 (MQ=255) gcTTGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTAAATACg > 1:992034/1‑139 (MQ=255) ttGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTaaa < 1:272041/133‑1 (MQ=255) ttGTTTCCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTaaa > 2:272041/1‑133 (MQ=255) tttcCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTAAATACGCTTaa < 2:1186356/139‑1 (MQ=255) tttcCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTAAATACGCTTaa < 1:934597/139‑1 (MQ=255) tttcCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTAAATACGCTTaa < 2:427113/139‑1 (MQ=255) | AGTGAACAGCGCCGGTTTACCATTTACCGGGCGGTTGAAGTTACAAGTCAAATACGCGACCGGTTTTTGCAAAGAACCATCAGCTTTACGCATCTGGCCTACGCAGTCATCCATCCACGCCCCGCCGCGCTTGTTTTCACGGGCATACAGATCGAGGTAGAAGCTACCGCGCAGTTCGTTATTTTCGTCATACAGTTCGAAGAAACGTACATCCGGATGCCAGACATCAACATCTTTACGCTCTTTAGCGGTGATGCCGTAAATACGCTTAA > NZ_CP009273/3637163‑3637434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |