| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,674,379 | G→T | H308N (CAT→AAT) | yhjJ ← | pitrilysin family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,674,379 | 0 | G | T | 93.6% | 247.8 / 7.5 | 80 | H308N (CAT→AAT) | yhjJ | pitrilysin family protein |
| Reads supporting (aligned to +/- strand): ref base G (3/2); new base T (39/34); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.09e-01 | |||||||||||
AGGTTGCTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACT > NZ_CP009273/3674249‑3674511 | aGGTTGCTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGaa > 1:1113997/1‑137 (MQ=255) tGCTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCATTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAgcgc > 2:854628/1‑139 (MQ=255) gCTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAgcgc < 1:887495/138‑1 (MQ=255) cTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCt > 1:321748/1‑139 (MQ=255) cTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCt > 2:185786/1‑139 (MQ=255) ttCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg < 1:570680/138‑1 (MQ=255) ttCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg < 1:1083722/138‑1 (MQ=255) ttCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg < 1:996425/138‑1 (MQ=255) aGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCgg < 2:1113997/138‑1 (MQ=255) tGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAg > 1:584727/1‑139 (MQ=255) tttGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCg < 2:905569/139‑1 (MQ=255) ggTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCg > 2:655238/1‑136 (MQ=255) ggTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCg < 1:655238/136‑1 (MQ=255) ttCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATTTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAg < 1:185786/139‑1 (MQ=255) gATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAg < 2:321748/139‑1 (MQ=255) aTGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg > 2:1193076/1‑108 (MQ=255) aTGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg < 1:1193076/108‑1 (MQ=255) tGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACGGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCt > 1:347544/1‑138 (MQ=255) tGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAg < 2:1081014/92‑1 (MQ=255) tGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAg > 1:1081014/1‑92 (MQ=255) tGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCt > 1:341735/1‑138 (MQ=255) tGCCCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATCCCAGAACAGCGCCTCGCGGCCCAGGTCCGCACGCCAGTACCGCAGCAGTGCGGCTg > 2:665959/1‑139 (MQ=255) gcgcACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGa > 2:1139543/1‑139 (MQ=255) gcgcACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGCGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGa > 1:489529/1‑139 (MQ=255) cgcacgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGAt > 2:127466/1‑139 (MQ=255) cgcacgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGAt > 1:1054961/1‑139 (MQ=255) cgcacgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGAt > 1:1056979/1‑139 (MQ=255) aGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTTTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGaa < 1:1139543/139‑1 (MQ=255) gATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg < 1:471053/89‑1 (MQ=255) gATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg > 2:471053/1‑89 (MQ=255) tACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCg > 1:994940/1‑139 (MQ=255) tACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCg > 1:577722/1‑139 (MQ=255) cAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCgg < 1:1082344/138‑1 (MQ=255) acacGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGcc < 1:127466/139‑1 (MQ=255) acacGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGcc < 1:854628/139‑1 (MQ=255) cacGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCa < 2:923292/139‑1 (MQ=255) cGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACg > 1:147992/1‑139 (MQ=255) cGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACg > 2:1239118/1‑139 (MQ=255) cGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACg > 1:425717/1‑139 (MQ=255) cGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACg > 1:1199959/1‑139 (MQ=255) ggCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACgg > 1:142340/1‑139 (MQ=255) ggCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACgg > 2:110963/1‑139 (MQ=255) ggCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACgg > 1:233062/1‑139 (MQ=255) cAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGACCATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGcc < 2:733429/94‑1 (MQ=255) cAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGcc > 1:733429/1‑94 (MQ=255) cAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCg < 1:326551/139‑1 (MQ=255) aGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCg > 1:294641/1‑138 (MQ=255) gTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTa < 2:584727/139‑1 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACg < 1:1128065/133‑1 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACg > 2:1128065/1‑133 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTAt > 2:166553/1‑139 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTAt > 1:979108/1‑139 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCa > 1:1216318/1‑131 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCa < 2:1216318/131‑1 (MQ=255) aaaTCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACGGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATcc < 2:347544/139‑1 (MQ=255) aaaTCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTTGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATc < 1:784056/138‑1 (MQ=255) aaaTCCAAGACCGATGTCTTGGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATc < 2:935013/138‑1 (MQ=255) ccAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCcaca < 2:1009943/139‑1 (MQ=255) cAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCcaca < 2:294641/138‑1 (MQ=255) cAAGACCGATGTCTTTGCTGTTACGGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCcaca < 2:756490/138‑1 (MQ=255) gACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACAt > 2:826084/1‑136 (MQ=255) gACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACAt < 1:826084/136‑1 (MQ=255) ccGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgatag < 1:765511/139‑1 (MQ=255) aTGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg > 2:519282/1‑57 (MQ=255) aTGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTcg < 1:519282/57‑1 (MQ=255) aTGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgatagat > 1:1168570/1‑138 (MQ=255) tACTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGc > 1:1088157/1‑107 (MQ=255) tACTGGCACTTAACGCTTGCTGAACATCCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGc < 2:1088157/107‑1 (MQ=255) aCTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAAc < 1:1212085/127‑1 (MQ=255) aCTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAAc > 2:1212085/1‑127 (MQ=255) aCTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACg > 2:307982/1‑138 (MQ=255) aCTGGCACTTAACGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACg > 1:908345/1‑138 (MQ=255) aaCGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCcaca > 2:1020403/1‑106 (MQ=255) aaCGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCcaca < 1:1020403/106‑1 (MQ=255) cGCTTGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtcagtc < 1:166553/139‑1 (MQ=255) tGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtcagtc < 2:1080946/135‑1 (MQ=255) tGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtcagtc > 1:1080946/1‑135 (MQ=255) tGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCataa > 1:488391/1‑139 (MQ=255) tGCTGAACATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCataa > 1:36023/1‑139 (MQ=255) aaCATTCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACt < 2:890055/138‑1 (MQ=255) | AGGTTGCTGTTCAGCTTGTCGTTTGGTGATTCGATGTTGATGGCACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACT > NZ_CP009273/3674249‑3674511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |