| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,708,729 | C→T | T342T (ACG→ACA) | bisC ← | biotin sulfoxide reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,708,729 | 0 | C | T | 96.7% | 329.8 / 0.0 | 90 | T342T (ACG→ACA) | bisC | biotin sulfoxide reductase |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (43/44); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01 | |||||||||||
TCGCAGCCACCCGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGCGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACAAATCTC > NZ_CP009273/3708592‑3708863 | tCGCAGCCACCCGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGCg < 1:1125377/139‑1 (MQ=255) ccACCCGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGa < 2:234649/139‑1 (MQ=255) ccACCCGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGa > 2:696887/1‑139 (MQ=255) cACCCGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGat < 1:216159/139‑1 (MQ=255) cccGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGatca > 2:243529/1‑139 (MQ=255) ccGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGatcat > 2:477360/1‑139 (MQ=255) gCCCTGCATGGAAAAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGtttt > 1:1187938/1‑139 (MQ=255) ccTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTg < 2:783865/139‑1 (MQ=255) cTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGCCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc < 1:874387/139‑1 (MQ=255) cTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc < 2:903445/139‑1 (MQ=255) cTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc < 1:199130/139‑1 (MQ=255) tGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc > 1:391189/1‑138 (MQ=255) tGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc < 2:391189/138‑1 (MQ=255) cATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCa > 2:479303/1‑139 (MQ=255) gagCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGt < 1:696887/139‑1 (MQ=255) agCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGtt > 2:1264566/1‑139 (MQ=255) agCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGtt > 1:316993/1‑139 (MQ=255) agCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGtt > 2:371681/1‑139 (MQ=255) agCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACAGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACg < 2:1161417/108‑1 (MQ=255) agCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACAGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACg > 1:1161417/1‑108 (MQ=255) agCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATAGTAAGAAAGACCAAAACCGCCGCCGGATGTGCCGCTTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGtt > 1:67092/1‑139 (MQ=255) gCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc > 2:521142/1‑125 (MQ=255) gCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGc < 1:521142/125‑1 (MQ=255) cACCGCAGAACGCCGCGTGGGGTTACCACCATTGGAAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTgg < 2:816664/139‑1 (MQ=255) ccGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGgcg < 2:316993/139‑1 (MQ=255) ccGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGgcg < 1:1116318/139‑1 (MQ=255) cGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGgcgc > 2:282905/1‑139 (MQ=255) cGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGgcgc > 2:1072391/1‑139 (MQ=255) cgccgcGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTc > 2:1004592/1‑139 (MQ=255) gccgcGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTcc < 2:670056/139‑1 (MQ=255) cgcgTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTcccc < 1:298737/139‑1 (MQ=255) cgcgTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTccc > 2:841490/1‑138 (MQ=255) cgcgTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTccc > 1:917546/1‑138 (MQ=255) cgcgTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTccc > 1:1132772/1‑138 (MQ=255) cgcgTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTccc > 2:442148/1‑138 (MQ=255) gggTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCt < 1:163970/138‑1 (MQ=255) gggTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTg < 1:1004592/139‑1 (MQ=255) gTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGcc < 2:116610/139‑1 (MQ=255) tACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt > 1:667781/1‑139 (MQ=255) accaccATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt > 1:1201226/1‑138 (MQ=255) accaccATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt < 1:295261/138‑1 (MQ=255) ccaccaTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt > 2:229411/1‑137 (MQ=255) ccaTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCa < 1:1173753/139‑1 (MQ=255) ccaTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCa < 1:243529/139‑1 (MQ=255) ccaTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCa < 1:780797/139‑1 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg > 1:24752/1‑139 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg > 2:416284/1‑139 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg > 2:278464/1‑139 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg > 2:851044/1‑139 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg < 2:72821/139‑1 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg > 2:689781/1‑139 (MQ=255) aTTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGCGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtg > 2:92161/1‑139 (MQ=255) ttGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtgg > 2:211811/1‑139 (MQ=255) ttGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCAtgg < 2:24752/139‑1 (MQ=255) aaaaTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTa > 2:467186/1‑139 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGgcg > 2:755339/1‑102 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGgcg < 1:755339/102‑1 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTAttt < 1:467186/139‑1 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTAttt > 2:777243/1‑139 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTAttt < 2:1132772/139‑1 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTAttt > 1:1270061/1‑139 (MQ=255) aTGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTAttt > 2:639863/1‑139 (MQ=255) aagaaagaCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTcccc > 1:1018257/1‑108 (MQ=255) aagaaagaCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTcccc < 2:1018257/108‑1 (MQ=255) gaaagaCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTCGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGa < 2:1187938/139‑1 (MQ=255) gaCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGaaaa > 2:395403/1‑138 (MQ=255) aCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt < 2:698493/111‑1 (MQ=255) aCCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt > 1:698493/1‑111 (MQ=255) ccAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGCGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAg > 2:839675/1‑139 (MQ=255) cgccgGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTc > 2:879248/1‑139 (MQ=255) gccgGGTGTGCCGATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTcg < 1:282905/139‑1 (MQ=255) gATTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCt < 1:395403/139‑1 (MQ=255) aTTTGCCCCAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTg > 2:710886/1‑139 (MQ=255) ccccAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCa < 1:879248/139‑1 (MQ=255) cccAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCAGCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGTTTAGTTTCGCTGCGCCaa < 2:67092/139‑1 (MQ=38) cccAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCaa < 1:776181/139‑1 (MQ=255) cAACATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAaca < 1:371681/139‑1 (MQ=255) cATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAAcacca < 1:479303/139‑1 (MQ=255) cATTGCTGCCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAAcacca < 1:505341/139‑1 (MQ=255) gctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAAcacca > 1:1127163/1‑135 (MQ=255) gctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAAcacca < 2:1127163/135‑1 (MQ=255) gctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACaaa > 2:487202/1‑139 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGt > 1:173449/1‑44 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGt < 2:173449/44‑1 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt > 1:66036/1‑70 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCAt < 2:66036/70‑1 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACAAAt < 1:639863/139‑1 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACAAAt < 1:710886/139‑1 (MQ=255) ctgcCAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACAAAt < 1:229411/139‑1 (MQ=255) ccAGTGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACAAAtctc > 2:765247/1‑139 (MQ=255) | TCGCAGCCACCCGGCAAGCTGCCCTGCATGGAAGAGAGCACCGCAGAACGCCGCGTGGGGTTACCACCATTGGCAAAATGGTAAGAAAGACCAAAACCGCCGCCGGGTGTGCCGATTTGCCCCAACATTGCTGCCAGCGTGACGATCATCCAGTGTTTTTGCTCACCAAACTGTTGGCGCTGCATTCCCCAGCCTGCCATCAGCATGGTGGTATTTTGGTGGAAAATAGCCGCCAGCTCGCGGATTTTCGCTGCGCCAACACCACAAATCTC > NZ_CP009273/3708592‑3708863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |