| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,766,062 | T→C | I141T (ATC→ACC) | mtlA → | PTS mannitol transporter subunit IICBA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,766,062 | 0 | T | C | 96.0% | 260.6 / 1.7 | 76 | I141T (ATC→ACC) | mtlA | PTS mannitol transporter subunit IICBA |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (41/32); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
TGTTCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAACCGGCGAAAA > NZ_CP009273/3765927‑3766196 | tGTTCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGGTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGTGATGACCCt < 1:594739/139‑1 (MQ=255) ttCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCg < 1:374565/139‑1 (MQ=255) tCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGc > 1:1164148/1‑139 (MQ=255) tCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGc > 2:1241555/1‑139 (MQ=255) tCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTAt > 1:496910/1‑139 (MQ=255) tGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCa < 2:837428/137‑1 (MQ=255) tGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCa < 2:484999/137‑1 (MQ=255) tGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCa < 2:171041/137‑1 (MQ=255) tGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCAtt > 1:727427/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTTGCTATTCTGGCATTCCTCg > 1:543849/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCg > 2:299612/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCg > 2:1031607/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCg > 2:196234/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCg > 2:48053/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCg > 1:1087837/1‑139 (MQ=255) gCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCg > 1:1012377/1‑139 (MQ=255) ggTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCa > 1:1231025/1‑139 (MQ=255) cTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCt > 1:784106/1‑110 (MQ=255) cTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCt < 2:784106/110‑1 (MQ=255) ggcggcTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGa < 2:1032770/139‑1 (MQ=255) ggcggcTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGa < 2:683298/139‑1 (MQ=255) cTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAttgtt > 2:333268/1‑139 (MQ=255) cTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAttgtt > 1:374159/1‑139 (MQ=255) gTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAttgttg < 2:374159/137‑1 (MQ=255) gCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGc > 1:1143751/1‑139 (MQ=255) cATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGcc < 1:1043618/139‑1 (MQ=255) aGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTc > 1:194229/1‑139 (MQ=255) cACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTcc > 1:1285436/1‑138 (MQ=255) aCTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGcc < 2:859532/131‑1 (MQ=255) aCTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGcc > 1:859532/1‑131 (MQ=255) ttCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCaaaa > 2:1263484/1‑139 (MQ=255) ttCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCaaaa > 2:29615/1‑139 (MQ=255) cGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATg > 1:862975/1‑139 (MQ=255) aCCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATgct < 1:196234/139‑1 (MQ=255) ggTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCg < 2:496910/139‑1 (MQ=255) ggTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCg < 1:1184908/139‑1 (MQ=255) cGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGtt < 2:930256/139‑1 (MQ=255) cGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGtt < 2:809529/139‑1 (MQ=255) aaGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACt > 1:129055/1‑139 (MQ=255) aaGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAt < 2:288599/98‑1 (MQ=255) aaGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAt > 1:288599/1‑98 (MQ=255) aaGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGt > 2:572316/1‑134 (MQ=255) aaGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGt < 1:572316/134‑1 (MQ=255) gATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGtt < 2:311261/133‑1 (MQ=255) gATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGtt > 1:311261/1‑133 (MQ=255) gATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACtt > 1:1072795/1‑138 (MQ=255) aTCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCa < 2:1214470/139‑1 (MQ=255) aaaTCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATgg < 2:1087837/139‑1 (MQ=255) aaTCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGt > 2:697911/1‑139 (MQ=255) aTCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGtt < 1:627479/139‑1 (MQ=255) gTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAt < 1:620235/85‑1 (MQ=255) gTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGAt > 2:620235/1‑85 (MQ=255) gTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGcc > 1:349864/1‑95 (MQ=255) gTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGcc < 2:349864/95‑1 (MQ=255) gTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCa < 2:727427/139‑1 (MQ=255) gTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCa > 2:884253/1‑139 (MQ=255) gCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACAtgctg > 1:1147731/1‑139 (MQ=255) gTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGc < 2:129055/139‑1 (MQ=255) aTAACTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGc < 2:194229/139‑1 (MQ=255) cTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCg > 1:386448/1‑61 (MQ=255) cTTCTCCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCg < 2:386448/61‑1 (MQ=255) tctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGc < 1:490059/129‑1 (MQ=255) tctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGc > 2:490059/1‑129 (MQ=255) tctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTAt > 1:530723/1‑139 (MQ=255) ctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATgctggctg > 1:953631/1‑89 (MQ=255) ctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATgctggctg < 2:953631/89‑1 (MQ=255) ctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTAt < 2:1164148/138‑1 (MQ=255) ctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTAt < 1:744204/138‑1 (MQ=255) ctcCGCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATc > 1:89235/1‑139 (MQ=255) gCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTc > 2:311584/1‑131 (MQ=255) gCAGGCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTc < 1:311584/131‑1 (MQ=255) ggCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGc < 2:1096045/121‑1 (MQ=255) ggCATCATCGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGc > 1:1096045/1‑121 (MQ=255) atcatcGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAAc > 1:220150/1‑139 (MQ=255) atcatcGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAAc > 1:993129/1‑139 (MQ=255) atcGGGATGACCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAACCgg > 2:356240/1‑139 (MQ=255) gatgacCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATC‑TTGTTGAACCGGCGaaaa > 2:1067241/1‑139 (MQ=255) | TGTTCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAACCGGCGAAAA > NZ_CP009273/3765927‑3766196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |