| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,781,002 | A→G | T269A (ACG→GCG) | envC → | murein hydrolase activator EnvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,781,002 | 0 | A | G | 89.9% | 214.0 / 14.7 | 79 | T269A (ACG→GCG) | envC | murein hydrolase activator EnvC |
| Reads supporting (aligned to +/- strand): ref base A (4/4); new base G (30/41); total (34/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
GCGAGCTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAA > NZ_CP009273/3780877‑3781133 | gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 2:589311/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 1:677396/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 2:926869/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 2:366578/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 1:74012/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 1:742159/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 1:18486/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 2:636511/139‑1 (MQ=255)gcgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGcac < 1:1078272/139‑1 (MQ=255) cgagcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac > 1:279028/1‑138 (MQ=255) gcTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCaccacc > 2:255328/1‑139 (MQ=255) cgcCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGTGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACaaa < 2:1050588/139‑1 (MQ=255) ccAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGGGGCGCGCAAAGGGAACAACTACCAacc > 2:760329/1‑139 (MQ=255) tCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGaa < 2:833910/139‑1 (MQ=255) aCAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCt < 2:829671/139‑1 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCt > 1:101591/1‑138 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 1:794730/139‑1 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:578493/139‑1 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:1231993/139‑1 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:279028/139‑1 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:672999/139‑1 (MQ=255) cAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:101591/139‑1 (MQ=255) cATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 1:406621/102‑1 (MQ=255) cATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac > 2:406621/1‑102 (MQ=255) cATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATg < 2:661154/139‑1 (MQ=255) ttGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 1:420422/134‑1 (MQ=255) ttGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg > 2:420422/1‑134 (MQ=255) ttGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTc > 2:142369/1‑139 (MQ=255) ttGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTc > 1:251268/1‑139 (MQ=255) ttGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTc > 1:804068/1‑139 (MQ=255) cccGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg > 1:1003641/1‑131 (MQ=255) cccGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:1003641/131‑1 (MQ=255) cccGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCg > 1:407006/1‑139 (MQ=255) cccGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCg < 2:765698/139‑1 (MQ=255) gTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac > 1:611488/1‑94 (MQ=255) gTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 2:611488/94‑1 (MQ=255) tGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTAcc > 2:912642/1‑139 (MQ=255) gCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGGACCg > 1:1005587/1‑139 (MQ=255) cGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCgg < 2:804068/139‑1 (MQ=255) cgcgGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTg < 2:693755/139‑1 (MQ=255) cggcgAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg > 1:1276860/1‑116 (MQ=255) cggcgAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:1276860/116‑1 (MQ=255) cggcgAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTggg > 1:772554/1‑139 (MQ=255) cggcgAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTggg > 1:140102/1‑139 (MQ=255) ggcgAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGgc > 2:601577/1‑139 (MQ=255) cgAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGgcgc < 2:1181967/139‑1 (MQ=255) aaGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCg > 2:554471/1‑118 (MQ=255) aaGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCg < 1:554471/118‑1 (MQ=255) cgTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGgcgcgc < 1:943810/63‑1 (MQ=255) cgTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGgcgcgc > 2:943810/1‑63 (MQ=255) tGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac > 2:1085989/1‑69 (MQ=255) tGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 1:1085989/69‑1 (MQ=255) tGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGt > 1:461711/1‑139 (MQ=255) tGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGt > 1:977669/1‑139 (MQ=255) aGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAg < 1:601577/139‑1 (MQ=255) cGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCAt > 1:94420/1‑139 (MQ=255) aaGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTg > 2:889683/1‑139 (MQ=255) gCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGc < 2:187399/139‑1 (MQ=255) cGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGcac < 2:894041/53‑1 (MQ=255) cGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGcac > 1:894041/1‑53 (MQ=255) tGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGtt > 2:807889/1‑139 (MQ=255) gAGGCCCAGGCGGTTCTCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGGGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTTGCCGGTTc > 1:1159608/1‑139 (MQ=255) gAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac < 2:951507/50‑1 (MQ=255) gAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGcac > 1:951507/1‑50 (MQ=255) aGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTcg < 2:1005587/139‑1 (MQ=255) cAGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGACAGGCATTCTGGCCGGTTCGCGGGc < 2:772554/139‑1 (MQ=255) aGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 1:258780/77‑1 (MQ=255) aGGCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg > 2:258780/1‑77 (MQ=255) ggCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGcc > 1:261651/1‑138 (MQ=255) ggCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:828913/76‑1 (MQ=255) ggCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg > 1:828913/1‑76 (MQ=255) ggCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGcc > 2:1056713/1‑138 (MQ=255) gCGGTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGa < 2:407006/139‑1 (MQ=255) gTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg > 1:366982/1‑72 (MQ=255) gTTCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTg < 2:366982/72‑1 (MQ=255) ttCGCGACCGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCt > 1:539734/1‑139 (MQ=255) cGCCAGAAAGAAGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCt < 1:807889/139‑1 (MQ=255) agaaagaaGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATgg < 2:538383/139‑1 (MQ=255) aaagaaGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCg < 1:142369/139‑1 (MQ=255) aaagaaGCGGCGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCg < 1:874408/139‑1 (MQ=255) agaagCGGCGCGCAAAGGCACCACCTACAAACCGGCCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGaa < 2:461711/139‑1 (MQ=255) | GCGAGCTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAA > NZ_CP009273/3780877‑3781133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |