| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,828,209 | T→A | I361F (ATC→TTC) | yicJ ← | glycoside‑pentoside‑hexuronide family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,828,209 | 0 | T | A | 95.5% | 322.9 / 5.2 | 89 | I361F (ATC→TTC) | yicJ | glycoside‑pentoside‑hexuronide family transporter |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base A (39/46); total (41/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.10e-01 | |||||||||||
TAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGC > NZ_CP009273/3828074‑3828341 | taatGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCTTCATATCCGCCCTAAGCCAGCATCCAGCTGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGAGTGCCAGCAAAACTGAAccc > 2:203060/1‑139 (MQ=255) atgCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGt > 1:181482/1‑137 (MQ=255) atgCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGt > 1:572554/1‑137 (MQ=255) aaTCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGt > 2:43503/1‑139 (MQ=255) ttCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGtt < 1:43503/138‑1 (MQ=255) atcttagcgcTGTTCTGCGCTTTTTCTCCCGCACCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGtt < 2:963162/133‑1 (MQ=255) accggggCGCTGTTCTCCGCTTTGGCTGCCACACCATCTCCGCCATAACCCAGCACCCCGCCGATAAGACCGTCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGTCAGCAAAACTGAACCCGGTCAGGCGtt < 2:26119/134‑1 (MQ=255) aTCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGtt < 1:963287/139‑1 (MQ=255) aTCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGtt < 2:966732/139‑1 (MQ=255) ggCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCa < 2:181482/139‑1 (MQ=255) gcgcTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCAt > 2:1199388/1‑139 (MQ=255) gcgcTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCAGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCAt > 2:1236727/1‑139 (MQ=255) tGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGca > 2:872794/1‑139 (MQ=255) ttCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGcac > 2:1192373/1‑138 (MQ=255) cgcTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGtt > 2:88639/1‑122 (MQ=255) cgcTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGtt < 1:88639/122‑1 (MQ=255) cgcTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCg < 2:650690/139‑1 (MQ=255) tttCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCg > 1:941665/1‑137 (MQ=255) tttCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCg > 1:309055/1‑137 (MQ=255) tttCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCg > 2:285071/1‑137 (MQ=255) tttCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCg > 1:136761/1‑137 (MQ=255) gCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa < 2:485936/139‑1 (MQ=255) gCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa > 2:757099/1‑139 (MQ=255) gCCGCATCATACCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa < 2:1001460/139‑1 (MQ=255) ccGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa < 1:1147014/138‑1 (MQ=255) cagCATCTTACCCGCCATATGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCCACCCCATTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa < 1:553086/136‑1 (MQ=255) cGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACg > 1:177202/1‑139 (MQ=255) atatCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCg < 1:472275/139‑1 (MQ=255) atCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 2:177202/139‑1 (MQ=255) tCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 1:467346/138‑1 (MQ=255) tCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 2:25029/138‑1 (MQ=255) tCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 2:310610/138‑1 (MQ=255) tCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 1:1099286/138‑1 (MQ=255) tCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTCCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 2:136761/138‑1 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTg < 1:995172/105‑1 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTg > 2:995172/1‑105 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 1:1161072/134‑1 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa > 2:1161072/1‑134 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa > 2:528957/1‑134 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 1:528957/134‑1 (MQ=255) ccATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGAcatca > 1:465764/1‑139 (MQ=255) cATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa < 1:1173169/133‑1 (MQ=255) cATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGa > 2:1173169/1‑133 (MQ=255) aTAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGAcatcat > 2:825598/1‑138 (MQ=255) aGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTAcc < 1:50741/139‑1 (MQ=255) aGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTAcc < 2:941665/139‑1 (MQ=255) aGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTAcc < 1:532832/139‑1 (MQ=255) ccAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCa < 1:825598/139‑1 (MQ=255) ccAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCa < 2:309055/139‑1 (MQ=255) cATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTg > 1:1282026/1‑138 (MQ=255) cATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTg > 1:733253/1‑138 (MQ=255) aTCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGa < 2:467929/139‑1 (MQ=255) aTCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGa < 2:478407/139‑1 (MQ=255) aTCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGa < 2:572554/139‑1 (MQ=255) aTCCAGCCGATAAGAGCGCCGCAGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGa < 1:1236727/139‑1 (MQ=255) ccGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa < 1:423835/106‑1 (MQ=255) ccGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGa > 2:423835/1‑106 (MQ=255) aTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAATCAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCa < 2:478726/139‑1 (MQ=255) aTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCTCCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCa < 2:68984/139‑1 (MQ=255) aTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCa > 2:283719/1‑125 (MQ=255) aTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCa < 1:283719/125‑1 (MQ=255) tAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCAc < 1:872794/139‑1 (MQ=255) agCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGt < 1:617390/139‑1 (MQ=255) cgccgcCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGtt > 2:893247/1‑138 (MQ=255) cgccgcCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTg < 2:1282026/139‑1 (MQ=255) cgccgcCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACCGAACCCGGTCAGGCGCTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGAACGGCGTCACCAGtt > 2:650329/1‑138 (MQ=255) gccgccGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGa < 1:1266892/139‑1 (MQ=255) ccgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGca < 1:1229299/77‑1 (MQ=255) ccgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGca > 2:1229299/1‑77 (MQ=255) cgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATg < 2:721175/139‑1 (MQ=255) aGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTg > 1:65144/1‑113 (MQ=255) aGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTg < 2:65144/113‑1 (MQ=255) aGCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATg > 1:257207/1‑138 (MQ=255) gCACAAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATg > 1:898673/1‑137 (MQ=255) caAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGa > 2:1159649/1‑138 (MQ=255) caAACAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGAc < 1:1091857/139‑1 (MQ=255) aaaCAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGAc > 1:648397/1‑138 (MQ=255) aaaCAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGAc > 2:1098242/1‑138 (MQ=255) aaCAGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACa > 2:632020/1‑138 (MQ=255) aGCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACa < 1:632020/139‑1 (MQ=255) gCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGa > 1:1182002/1‑87 (MQ=255) gCGTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGa < 2:1182002/87‑1 (MQ=255) gTGCCAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAg > 2:474634/1‑139 (MQ=255) ccAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCgg < 2:708133/64‑1 (MQ=255) ccAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCgg > 1:708133/1‑64 (MQ=255) ccAGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGa > 2:690658/1‑139 (MQ=255) aGCAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATg > 2:621848/1‑139 (MQ=255) cAAAACTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCt > 2:778192/1‑139 (MQ=255) aaCTGAACCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGc < 2:148183/139‑1 (MQ=255) | TAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGC > NZ_CP009273/3828074‑3828341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |