| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,845,367 | T→C | M260V (ATG→GTG) | ilvB ← | acetolactate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,845,367 | 0 | T | C | 96.0% | 245.8 / 0.9 | 74 | M260V (ATG→GTG) | ilvB | acetolactate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (34/37); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
AATGATTTTGGCATTCGGACAGAACTGCTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCATACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCACCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCAC > NZ_CP009273/3845233‑3845502 | aatgaTTTTGGCATTCGGACAGAACTGCTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACAcc > 2:805573/1‑138 (MQ=255)aatgaTTTTGGCATTCGGACAGAACTGCTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACAcc > 1:26712/1‑138 (MQ=255) tgaTTTTGGCATTCGGACAGAACTGCTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAg > 2:617602/1‑139 (MQ=255) cGGACAGAACTGCTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATgc > 2:614629/1‑139 (MQ=255) cTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCaa > 1:697555/1‑138 (MQ=255) cTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCaa > 1:206259/1‑138 (MQ=255) cTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAAc < 2:229059/139‑1 (MQ=255) ttttGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCATACCCAGCGACAACGGATGCGCTTTTGGCAACATGcc > 2:802149/1‑139 (MQ=255) ttttGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGcc > 1:915048/1‑139 (MQ=255) ttttGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGcc < 2:697555/139‑1 (MQ=255) ttGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGcc > 1:274877/1‑137 (MQ=255) gCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAg < 1:394535/138‑1 (MQ=255) gCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAg < 2:243923/138‑1 (MQ=255) gCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAg < 1:780004/138‑1 (MQ=255) ggTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGt < 1:805573/139‑1 (MQ=255) tcatcaAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCa < 2:613852/139‑1 (MQ=255) tcatcaAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCa < 1:572197/139‑1 (MQ=255) tcatcaAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCa < 1:570276/139‑1 (MQ=255) tcatcaAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCa < 2:1125217/139‑1 (MQ=255) tcatcaAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCa < 2:800134/139‑1 (MQ=255) tcatcaAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCa < 2:80393/139‑1 (MQ=255) gcgcACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAgg > 2:457622/1‑139 (MQ=255) gcgcACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAgg > 1:822255/1‑139 (MQ=255) cACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAAc < 2:790855/104‑1 (MQ=255) cACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAAc > 1:790855/1‑104 (MQ=255) aGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTgcg < 1:1047042/139‑1 (MQ=255) aTCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTtct > 2:505812/1‑139 (MQ=255) caacaaATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGt > 2:999556/1‑111 (MQ=255) caacaaATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGt < 1:999556/111‑1 (MQ=255) caacaaATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTcc > 1:488387/1‑139 (MQ=255) caacaaATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTcc > 1:15777/1‑139 (MQ=255) acaaATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGc < 2:1052807/139‑1 (MQ=255) aaaTCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGc > 2:755847/1‑137 (MQ=255) tCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGtt > 2:594448/1‑139 (MQ=255) tCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGtt > 2:745122/1‑139 (MQ=255) cGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATgcg < 1:101770/71‑1 (MQ=255) cGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATgcg > 2:101770/1‑71 (MQ=255) cGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTc < 1:44633/138‑1 (MQ=255) cGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCa < 1:614629/139‑1 (MQ=255) gCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCAc < 2:107775/139‑1 (MQ=255) cctcctGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACg > 2:431649/1‑139 (MQ=255) ctGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCATACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCAc < 1:802149/138‑1 (MQ=255) aaaaTATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTg < 1:561993/139‑1 (MQ=255) atatAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCgg < 1:494550/139‑1 (MQ=255) aGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCgg > 1:121610/1‑135 (MQ=255) aGTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCgg < 2:121610/135‑1 (MQ=255) gTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GTT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCa < 2:402850/139‑1 (MQ=255) gTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGgcgc < 1:457622/138‑1 (MQ=255) gTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCa < 1:505812/139‑1 (MQ=255) gTTGGTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCa < 2:26712/139‑1 (MQ=255) gTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCAtt > 1:617723/1‑137 (MQ=255) gTGCTGCGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCAtt < 2:617723/137‑1 (MQ=255) tgctgcGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAgg > 1:748324/1‑91 (MQ=255) tgctgcGCACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAgg < 2:748324/91‑1 (MQ=255) cgcACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGTCAGTTGCGCTTTCTCCGCCAGTTCCCGCCCCCGTg > 2:476119/1‑121 (MQ=255) cgcACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTg < 1:476119/121‑1 (MQ=255) cgcACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCacac > 1:1104133/1‑139 (MQ=255) cgcACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGAGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCacac > 2:278592/1‑139 (MQ=255) cACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccg < 2:527724/139‑1 (MQ=255) cACGCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccg < 1:594448/139‑1 (MQ=255) gCCGTGCATCCCCAGCATACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCACCCGTGCGGGCGCATTGATCACAccgccg > 1:335901/1‑139 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCATGGCGGTAG‑‑‑GGTAGGCAGTTGCGCTTTCCCCGCCAGTTCa > 2:707123/1‑111 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGTGGTAGGGTAGGCAGTTGCGCTTTCCCCGCCAGTTCa < 1:707123/111‑1 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccgccg > 2:137695/1‑139 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccgccg > 2:1276352/1‑139 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccgccg > 2:126241/1‑139 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccgccg > 1:64801/1‑139 (MQ=255) gCCGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACAccgccg > 1:671486/1‑139 (MQ=255) ccGTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACACcgccgc < 1:218065/139‑1 (MQ=255) gTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACACCGCCGccc < 2:274877/139‑1 (MQ=255) gTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACACCGCCGccc < 2:15777/139‑1 (MQ=255) gTGCATCCCCAGCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACACCGCCGccc < 1:437851/139‑1 (MQ=255) gCACACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCAc > 1:909206/1‑139 (MQ=255) gCACACCCAGCGACAACGGATCCGCTTTTAGCAACATGCCCAGCGCCCTTAAAGTCAT‑‑‑GAT‑‑‑‑‑GGTAGGCAGTTTCGCTTTCTCCGCCAGTTCACGCCCCCGTGCGGGCGCATTGATCACACCGCCGCCCTGATAAAGCAc > 1:1082325/1‑139 (MQ=255) | AATGATTTTGGCATTCGGACAGAACTGCTCGGTTTTGCCAATCGCCCGGTCATCAAAACGCGCACCGAGCACTATCAACAAATCCGCCTCCTGCAAAATATAGTTGGTGCTGCGCACGCCGTGCATCCCCAGCATACCCAGCGACAACGGATGCGCTTTTGGCAACATGCCCAGCGCCATTAAAGTCAT‑‑‑GGT‑‑‑‑‑GGTAGGCAGTTGCGCTTTCTCCGCCAGTTCACGCACCCGTGCGGGCGCATTGATCACACCGCCGCCCAGATAAAGCAC > NZ_CP009273/3845233‑3845502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |