| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,994,324 | A→G | V31V (GTT→GTC) | yigE ← | phosphodiester glycosidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,994,324 | 0 | A | G | 88.6% | 217.7 / 20.2 | 79 | V31V (GTT→GTC) | yigE | phosphodiester glycosidase family protein |
| Reads supporting (aligned to +/- strand): ref base A (4/5); new base G (40/30); total (44/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
AGCAGAGCATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTATAGGTCCTGGATGTGGGATTTTTTTATCCTGTTAGCGACC > NZ_CP009273/3994190‑3994458 | agcagAGCATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAg < 2:563278/139‑1 (MQ=255) agCATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCaaa > 1:519806/1‑138 (MQ=255) cATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAAc > 1:168999/1‑137 (MQ=255) cATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAAc > 2:689697/1‑137 (MQ=255) cATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACaa < 2:500576/139‑1 (MQ=255) tGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAgg < 1:734287/139‑1 (MQ=255) tCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAg > 2:66382/1‑139 (MQ=255) cccACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGt > 1:837362/1‑139 (MQ=255) ccACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTg < 1:238519/139‑1 (MQ=255) ccACGCTTCACCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTg < 2:822655/139‑1 (MQ=255) cACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGt > 2:403261/1‑137 (MQ=255) gCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAggg < 1:555364/139‑1 (MQ=255) tGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGCGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGaaaaac > 2:257123/1‑138 (MQ=255) ttGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGttt < 1:1210979/138‑1 (MQ=255) aGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGAtt > 1:237537/1‑139 (MQ=255) gTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTc < 2:804233/139‑1 (MQ=255) cATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAg > 1:329082/1‑139 (MQ=255) aTTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAgg < 2:329082/139‑1 (MQ=255) tttCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACaa > 1:87150/1‑93 (MQ=255) tttCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACaa < 2:87150/93‑1 (MQ=255) tttCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGt > 1:1261633/1‑138 (MQ=255) tttCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGt > 2:1186290/1‑138 (MQ=255) cACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGAt < 2:519806/138‑1 (MQ=255) tGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCtt < 1:638695/137‑1 (MQ=255) aTTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGt < 2:837362/139‑1 (MQ=255) aaCGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAAt > 2:561007/1‑132 (MQ=255) aaCGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAAt < 1:561007/132‑1 (MQ=255) aaCGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGc > 1:1167614/1‑139 (MQ=255) aaCGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGCGATCATTCCTTTACCAATGAGTAGc > 2:841372/1‑139 (MQ=255) tataCGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATg < 1:877552/139‑1 (MQ=255) tataCGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATg < 2:2996/139‑1 (MQ=255) tACGGTCAGCGTCGTATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 1:1157700/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTGCCAATGAGTAGCTGATGCGCCATta > 2:1108074/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGGTGCGCCATta > 2:235529/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATgcg > 2:447672/1‑131 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATgcg < 1:447672/131‑1 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATgc > 1:748298/1‑130 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATgc < 2:748298/130‑1 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATtaca < 1:219650/139‑3 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATtaca < 2:794860/139‑3 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 2:219650/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 2:19679/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 2:104852/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 1:1231202/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 1:180808/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 1:794860/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 1:851572/1‑137 (MQ=255) tACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATta > 1:1273148/1‑137 (MQ=255) gTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTc < 2:1167614/139‑1 (MQ=255) tCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCa < 2:1183889/90‑1 (MQ=255) tCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCa > 1:1183889/1‑90 (MQ=255) tCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTcc > 1:1206863/1‑139 (MQ=255) aGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTg > 1:876527/1‑139 (MQ=255) aTCTGAGAGTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTgg > 2:440586/1‑138 (MQ=255) agagTGCGCAATCATCAGCGTCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGATAAAAACCCGTTTGATATTCAAGGTGATCATTCCTTTACCAATGAGTACCTGATGCGCCATTACCGCTCCTGGATGTTGGa < 2:599080/135‑1 (MQ=255) agagTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGa < 2:876527/135‑1 (MQ=255) agagTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGAtttt > 1:132911/1‑139 (MQ=255) agagTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGAtt < 1:66382/137‑1 (MQ=255) agagTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGCGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGa < 1:841372/135‑1 (MQ=255) agTGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGAtttttt < 2:132911/139‑1 (MQ=255) tGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCa > 1:1103701/1‑91 (MQ=255) tGCGCAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCa < 2:1103701/91‑1 (MQ=255) gcgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTAt > 1:432393/1‑139 (MQ=255) gcgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTAt > 2:325374/1‑139 (MQ=255) cgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCtt < 2:1184737/84‑1 (MQ=255) cgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCtt > 1:1184737/1‑84 (MQ=255) cgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATc > 1:692396/1‑139 (MQ=255) cgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATc > 2:1094046/1‑139 (MQ=255) cgcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATc > 1:1260187/1‑139 (MQ=255) cgcAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCt < 1:412971/83‑1 (MQ=255) cgcAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCt > 2:412971/1‑83 (MQ=255) gcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATcc < 2:598235/139‑1 (MQ=255) gcAATCATCAGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATcc < 1:1241307/139‑1 (MQ=255) atcaGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTATAGGTCCTGGATGTGGGATTTTTTTATCCTGTTAg < 2:1157700/139‑1 (MQ=255) aGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATtac > 1:158545/1‑101 (MQ=255) aGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATtac < 2:158545/102‑2 (MQ=255) aGCGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATCCTGTTAGCGa > 2:1195380/1‑139 (MQ=255) cGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATCCTGTTAGCGAcc > 1:378214/1‑139 (MQ=255) cGGCGACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAACCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTACAGGTCCTGGATGTGGGATTTTTTTATCCTGTTAGCGAcc < 2:432393/139‑1 (MQ=255) | AGCAGAGCATGTAACGTTCCCCACGCTTCGCCATTGGCTTTTTGCCAGTACATTTTCACCCGCTCTGTTTGAGGATTAACGGTATACGCCTGTACGGTCAGCGTCGGATCTGAGAGTGCGCAATCATCAGCGGCAACAGCAAACAAGGGAAGTAAGGTGAGGGCGAGAAAAATCCGTTTGAGATTCAAGGTGATCATTCCTTTACCAATGAGTAGCTGATGCGCCATTATAGGTCCTGGATGTGGGATTTTTTTATCCTGTTAGCGACC > NZ_CP009273/3994190‑3994458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |