| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,081,683 | C→T | E511E (GAG→GAA) | frvR ← | putative frv operon regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,081,683 | 0 | C | T | 92.6% | 267.9 / 8.0 | 81 | E511E (GAG→GAA) | frvR | putative frv operon regulatory protein |
| Reads supporting (aligned to +/- strand): ref base C (3/3); new base T (36/39); total (39/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-01 | |||||||||||
TGCCAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCA > NZ_CP009273/4081551‑4081809 | tGCCAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGt > 1:957221/1‑139 (MQ=255) gCCAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTg < 2:988663/137‑1 (MQ=255) gCCAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGtt > 1:1241665/1‑139 (MQ=255) ccAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGtt < 1:138391/138‑1 (MQ=255) ccAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTc > 2:650300/1‑139 (MQ=255) ccAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTc > 1:875052/1‑139 (MQ=255) cAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCg < 1:1093477/139‑1 (MQ=255) aGATAGCTAAATAGTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGc < 2:196236/139‑1 (MQ=255) tAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTcc < 1:1035840/139‑1 (MQ=255) tAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTcc < 2:707391/139‑1 (MQ=255) gCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAg < 1:373827/139‑1 (MQ=255) aaaTATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCaa > 2:1186192/1‑139 (MQ=255) aaTATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCa < 1:756198/137‑1 (MQ=255) ttttAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTgg > 1:485246/1‑138 (MQ=255) ttAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGAt > 1:988816/1‑139 (MQ=255) ttAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGAt > 2:1142922/1‑139 (MQ=255) aTGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATggcgagg > 1:749756/1‑139 (MQ=255) cgcATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGAtt > 1:696856/1‑138 (MQ=255) cATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGtt > 2:658639/1‑105 (MQ=255) cATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGtt < 1:658639/105‑1 (MQ=255) tCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACaa > 2:119430/1‑139 (MQ=255) ggcggcggcGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACTTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATc < 2:550448/139‑1 (MQ=255) ggcggcggcGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAAt < 1:537052/138‑1 (MQ=255) ggcgCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGttt < 2:146172/139‑1 (MQ=255) aGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCAcc < 1:1103874/139‑1 (MQ=255) aTCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCAccttcgc > 2:597455/1‑139 (MQ=255) cATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTcgcg < 1:957725/139‑1 (MQ=255) aTGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCgg < 1:863754/139‑1 (MQ=255) gTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAg > 1:87830/1‑82 (MQ=255) gTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAg < 2:87830/82‑1 (MQ=255) gTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGc > 2:749622/1‑138 (MQ=255) gTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCg < 2:1241665/139‑1 (MQ=255) gTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGc > 1:828088/1‑138 (MQ=255) ttAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCga > 1:440183/1‑139 (MQ=255) aTGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCgatga > 2:236845/1‑139 (MQ=255) aTGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCgatga > 2:1205954/1‑139 (MQ=255) aTGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCgatga > 2:1023171/1‑139 (MQ=255) tGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCgatgat < 1:885832/139‑1 (MQ=255) cTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg < 1:250946/139‑1 (MQ=255) tCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGtt < 1:791247/64‑1 (MQ=255) tCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGtt > 2:791247/1‑64 (MQ=255) cGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCgatgat < 1:692147/133‑1 (MQ=255) cGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCgatgat > 2:692147/1‑133 (MQ=255) cGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTtg > 2:293199/1‑139 (MQ=255) aCCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCAt < 2:696856/139‑1 (MQ=255) ccTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATc < 1:1205954/139‑1 (MQ=255) cTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg < 1:292686/126‑1 (MQ=255) cTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg > 2:292686/1‑126 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcggcg > 2:1159442/1‑139 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcggcg > 1:706438/1‑139 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 2:749756/137‑1 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:1023171/137‑1 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:1142922/137‑1 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:650300/137‑1 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:293199/137‑1 (MQ=255) aaCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:812602/137‑1 (MQ=255) aCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcggcgg < 2:3340/139‑1 (MQ=255) aCTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcggcgg < 1:236845/139‑1 (MQ=255) gTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTaa > 1:143717/1‑138 (MQ=255) gTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAat < 1:459845/139‑1 (MQ=255) gTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAat < 1:573499/139‑1 (MQ=255) ttGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAata < 2:990615/139‑1 (MQ=255) tGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:88160/130‑1 (MQ=255) tGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg > 2:88160/1‑130 (MQ=255) tGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAattt > 2:1197680/1‑137 (MQ=255) gCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 1:977484/127‑1 (MQ=255) gCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg > 2:977484/1‑127 (MQ=255) gCGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGgt > 2:480105/1‑139 (MQ=255) cGAGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGgtg < 2:745198/139‑1 (MQ=255) aGGGTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTTATATGGtgtt > 2:855971/1‑139 (MQ=255) ggTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGtgttgt > 1:609510/1‑139 (MQ=255) ggTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGgggtgt > 2:269252/1‑139 (MQ=255) gTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg < 2:146511/107‑1 (MQ=255) gTAATAAAAAATCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg > 1:146511/1‑107 (MQ=255) aTCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcggcgg > 2:145332/1‑114 (MQ=255) aTCCACGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcggcgg < 1:145332/114‑1 (MQ=255) aCGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGGGGTGTGCGACTAATTGCGca > 2:139028/1‑139 (MQ=255) cGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg > 1:946093/1‑106 (MQ=255) cGAAAACGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATcgg < 2:946093/106‑1 (MQ=255) aaCGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg > 2:92330/1‑88 (MQ=255) aaCGTCGTTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCg < 1:92330/88‑1 (MQ=255) | TGCCAGATAGCTAAATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCA > NZ_CP009273/4081551‑4081809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |