| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,140,022 | T→C | I58V (ATC→GTC) | eptC ← | phosphoethanolamine transferase CptA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,140,022 | 0 | T | C | 92.3% | 277.3 / 9.8 | 91 | I58V (ATC→GTC) | eptC | phosphoethanolamine transferase CptA |
| Reads supporting (aligned to +/- strand): ref base T (3/4); new base C (37/47); total (40/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.47e-02 | |||||||||||
AGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGC > NZ_CP009273/4139892‑4140156 | aGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACcaca < 2:962049/139‑1 (MQ=255)aGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACcaca < 2:10091/139‑1 (MQ=255) gAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAg > 1:852670/1‑139 (MQ=255) aaCGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGc > 1:784565/1‑139 (MQ=255) aCGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCg < 1:380892/139‑1 (MQ=255) gCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 2:62148/139‑1 (MQ=255) gCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 2:617729/139‑1 (MQ=255) gCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 2:500884/139‑1 (MQ=255) gCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 2:243484/139‑1 (MQ=255) tctGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 2:860709/137‑1 (MQ=255) tctGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa > 1:860709/1‑137 (MQ=255) gCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGaa > 1:1004412/1‑134 (MQ=255) gCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGaa < 2:1004412/134‑1 (MQ=255) cTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGc > 2:314683/1‑139 (MQ=255) tGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGt > 1:1196342/1‑139 (MQ=255) gACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTc > 1:550427/1‑139 (MQ=255) cGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTcgcg < 2:142435/139‑1 (MQ=255) tAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGaa > 2:277216/1‑139 (MQ=255) aGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAAt > 1:497290/1‑139 (MQ=255) cGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa > 2:64282/1‑110 (MQ=255) cGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 1:64282/110‑1 (MQ=255) cGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGtt < 1:10164/139‑1 (MQ=255) agtagCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGt > 2:725176/1‑139 (MQ=255) gtagCGCAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg < 2:152551/139‑1 (MQ=255) gtagCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGt < 1:247290/138‑1 (MQ=255) gCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGcc < 2:966809/138‑1 (MQ=255) gCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCa < 1:156225/139‑1 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAg < 2:953279/112‑1 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAg > 1:953279/1‑112 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGt < 2:274757/129‑1 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGt > 1:274757/1‑129 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg < 2:894903/130‑1 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg > 1:894903/1‑130 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATaa > 2:550576/1‑139 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATaa > 1:671152/1‑139 (MQ=255) cgccgcCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATaa > 2:632066/1‑139 (MQ=255) ccgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAAc > 1:1208883/1‑138 (MQ=255) ccgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAAc > 2:626820/1‑138 (MQ=255) cgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa < 1:277216/139‑1 (MQ=255) cgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa < 2:431776/139‑1 (MQ=255) cgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa < 1:632066/139‑1 (MQ=255) cAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTg < 1:626820/139‑1 (MQ=255) cAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTg < 2:377158/139‑1 (MQ=255) cAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTg < 2:852670/139‑1 (MQ=255) gagGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGt < 2:550427/139‑1 (MQ=255) aTAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGc > 2:721878/1‑139 (MQ=255) tAGCACCCCTCCTTTTCCTTCTGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCTTTAGTGCCACTGTACCCACTGATGTAAATAATGGcc < 1:685159/139‑1 (MQ=255) tAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGcc < 2:784565/139‑1 (MQ=255) ccacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAg < 2:1208883/139‑1 (MQ=255) cacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAg > 2:749667/1‑138 (MQ=255) acGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa < 1:1214307/69‑1 (MQ=255) acGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGaa > 2:1214307/1‑69 (MQ=255) acGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCa < 2:1161607/105‑1 (MQ=255) acGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCa > 1:1161607/1‑105 (MQ=255) acGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAg > 1:1210350/1‑137 (MQ=255) acGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCa < 1:576225/139‑1 (MQ=255) aTTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg > 1:697420/1‑96 (MQ=255) aTTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg < 2:697420/96‑1 (MQ=255) aCTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTagag > 1:399407/1‑138 (MQ=255) cTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCATAGTAGAGaa < 1:595785/139‑1 (MQ=255) cGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACt < 1:550121/58‑1 (MQ=255) cGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACt > 2:550121/1‑58 (MQ=255) cGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGaaaaa > 2:538884/1‑139 (MQ=255) gCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAAcc < 2:1210350/139‑1 (MQ=255) gCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAAcc < 1:538884/139‑1 (MQ=255) cAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAaataa < 2:1017594/111‑1 (MQ=255) cAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAaataa > 1:1017594/1‑111 (MQ=255) ataatTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg < 1:1038003/84‑1 (MQ=255) ataatTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg > 2:1038003/1‑84 (MQ=255) ataatTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCaa > 1:1039680/1‑138 (MQ=255) atTTTAATCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAg > 2:723618/1‑138 (MQ=255) aaTCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTagag < 2:907229/138‑1 (MQ=255) aaTCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTagag < 1:659577/138‑1 (MQ=255) aaTCCGCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTagag < 1:749667/138‑1 (MQ=255) aTCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCa < 2:1120765/139‑1 (MQ=255) gCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa < 2:1044363/83‑1 (MQ=255) gCTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa > 1:1044363/1‑83 (MQ=255) cTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAg < 1:965428/105‑1 (MQ=255) cTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAg > 2:965428/1‑105 (MQ=255) cTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGcc > 2:1098295/1‑139 (MQ=255) cTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGcc < 2:318683/139‑1 (MQ=255) cTTCGGAAAGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGcc < 1:494153/139‑1 (MQ=255) aaGAGGAATACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCa < 2:335312/139‑1 (MQ=255) tACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTc < 1:1098295/139‑1 (MQ=255) tACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTc > 2:1043908/1‑139 (MQ=255) tACCGGGACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTc > 1:1109979/1‑139 (MQ=255) ggACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa > 1:556363/1‑62 (MQ=255) ggACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCa < 2:556363/62‑1 (MQ=255) ggACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAaataa < 2:426799/75‑1 (MQ=255) ggACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAaataa > 1:426799/1‑75 (MQ=255) ggACCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGc > 1:535565/1‑138 (MQ=255) tCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGc > 1:1285434/1‑76 (MQ=255) tCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGc < 2:1285434/76‑1 (MQ=255) | AGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGC > NZ_CP009273/4139892‑4140156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |