Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 4,324,872 T→G Y179S (TAC→TCC)  eptA ← phosphoethanolamine transferase EptA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092734,324,8720TG100.0% 283.6 / NA 77Y179S (TAC→TCC) eptAphosphoethanolamine transferase EptA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (39/38);  total (39/38)

TGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGTAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGATTTTTATCCAGCAGGCAATCAGCG  >  NZ_CP009273/4324737‑4325001
                                                                                                                                       |                                                                                                                                 
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:1022160/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:763957/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:1048553/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:388575/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:188313/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:1016091/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:1218588/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:753592/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                >  1:58710/1‑139 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:404358/139‑1 (MQ=255)
tGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:230332/139‑1 (MQ=255)
                ttCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTgc                                                                                                                >  2:168572/1‑139 (MQ=255)
                 tCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTgcg                                                                                                               >  2:873602/1‑139 (MQ=255)
                    cACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTgcggc                                                                                                             >  1:1228084/1‑138 (MQ=255)
                      ccAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGAc                                                                                                          <  1:486707/139‑1 (MQ=255)
                       cAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                >  1:1103263/1‑116 (MQ=255)
                       cAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:1103263/116‑1 (MQ=255)
                        aGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGAc                                                                                                          >  2:90359/1‑137 (MQ=255)
                          cGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAg                                                                                                       >  2:697654/1‑138 (MQ=255)
                          cGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAg                                                                                                       >  1:744874/1‑138 (MQ=255)
                             cAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCaaa                                                                                                   <  2:529482/139‑1 (MQ=255)
                               gATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAAt                                                                                                 <  2:114201/139‑1 (MQ=255)
                                   tGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCag                                                                                              <  2:58710/138‑1 (MQ=255)
                                       aGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAATAGTGCGGCGACCAGCAAAATCAgtagta                                                                                         >  1:64305/1‑139 (MQ=255)
                                          cGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                >  1:158373/1‑97 (MQ=255)
                                          cGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:158373/97‑1 (MQ=255)
                                          cGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAgtagta                                                                                         >  1:104367/1‑136 (MQ=255)
                                           gCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGa                                                                                     <  2:716767/139‑1 (MQ=255)
                                                tGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCa                                                                                <  2:631664/139‑1 (MQ=255)
                                                      tACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  2:900918/85‑1 (MQ=255)
                                                      tACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                >  1:900918/1‑85 (MQ=255)
                                                      tACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAatat                                                                          >  2:939468/1‑139 (MQ=255)
                                                      tACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAatat                                                                          >  1:1171218/1‑139 (MQ=255)
                                                         cATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAATAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTgg                                                                       <  2:64305/139‑1 (MQ=255)
                                                         cATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATGTTgg                                                                       <  2:104367/139‑1 (MQ=255)
                                                             aCCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCagta                                                                                            >  2:800446/1‑114 (MQ=255)
                                                             aCCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCagta                                                                                            <  1:800446/114‑1 (MQ=255)
                                                             aCCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTc                                                                    >  1:335108/1‑138 (MQ=255)
                                                              ccAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                >  2:1261151/1‑77 (MQ=255)
                                                              ccAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:1261151/77‑1 (MQ=255)
                                                              ccAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCa                                                                  <  1:235543/139‑1 (MQ=255)
                                                              ccAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCa                                                                  >  1:1219951/1‑139 (MQ=255)
                                                                aGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                >  2:610442/1‑75 (MQ=255)
                                                                aGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGt                                                                                                                                <  1:610442/75‑1 (MQ=255)
                                                                aGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACg                                                                <  2:1219951/139‑1 (MQ=255)
                                                                aGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACg                                                                <  1:873602/139‑1 (MQ=255)
                                                                  cTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACgg                                                               >  2:324372/1‑138 (MQ=255)
                                                                       aacaaTGCTGTTAGAGGGTCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACa                                                                                                                    <  1:685170/80‑1 (MQ=255)
                                                                       aacaaTGCTGTTAGAGGGTCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACa                                                                                                                    >  2:685170/1‑80 (MQ=255)
                                                                            tGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACt                                                    >  1:540930/1‑139 (MQ=255)
                                                                                 ttAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTgcg                                                 <  1:541218/137‑1 (MQ=255)
                                                                                   agagGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACATTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGa                                             >  2:503003/1‑139 (MQ=255)
                                                                                   agagGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGaa                                                        >  2:187548/1‑128 (MQ=255)
                                                                                   agagGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGaa                                                        <  1:187548/128‑1 (MQ=255)
                                                                                   agagGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGa                                             >  1:287497/1‑139 (MQ=255)
                                                                                         gCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAg                                       >  1:902323/1‑139 (MQ=255)
                                                                                           ttAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGt                                     >  2:322954/1‑139 (MQ=255)
                                                                                           ttAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGt                                     >  1:587549/1‑139 (MQ=255)
                                                                                           ttAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGt                                     >  1:1000835/1‑139 (MQ=255)
                                                                                              aGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGc                                  <  1:324372/139‑1 (MQ=255)
                                                                                                  attCACCAGCGCTTTGTTATTGCGGAACAACGAGGCGGAGTCATTATAAAACAGTGCAGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCGGGt                              <  2:447280/138‑1 (MQ=255)
                                                                                                   ttCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGtt                             >  2:1157115/1‑139 (MQ=255)
                                                                                                   ttCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGtt                             >  2:1283998/1‑139 (MQ=255)
                                                                                                   ttCACCAGCTCTTTGCTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGtt                             >  2:89030/1‑139 (MQ=255)
                                                                                                      aCCAGCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGa                          <  2:1278645/139‑1 (MQ=255)
                                                                                                          gCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGAtttt                      >  1:1188152/1‑139 (MQ=255)
                                                                                                          gCTCTTTGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGAtttt                      >  1:359320/1‑139 (MQ=255)
                                                                                                                tGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAAt                                                                                                 <  1:797521/58‑1 (MQ=255)
                                                                                                                tGTTATTGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAAt                                                                                                 >  2:797521/1‑58 (MQ=255)
                                                                                                                     ttGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGAcc                                                                                                         >  1:11555/1‑45 (MQ=255)
                                                                                                                     ttGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGAcc                                                                                                         <  2:11555/45‑1 (MQ=255)
                                                                                                                     ttGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCa                                                                  <  2:976394/84‑1 (MQ=255)
                                                                                                                     ttGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCa                                                                  >  1:976394/1‑84 (MQ=255)
                                                                                                                      tGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGATTTTTATCcagc              <  2:277913/135‑1 (MQ=255)
                                                                                                                      tGCGGAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGATTTTTATCcagc              >  1:277913/1‑135 (MQ=255)
                                                                                                                          gAACAACGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGATTTTTATCCAGCAGGCAAt       >  2:1285478/1‑138 (MQ=255)
                                                                                                                              aacGAGGCGGAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGATTTTTATCCAGCAGGCAATCAgcg  <  1:824972/139‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                 
TGCGCGTCTTCACCAATTCGCACCAGCGGCAGATTTGCCAGTCGCTGATGGGAGTACCATGACCAGCTGGCAACAATGCTGTTAGAGGGGCTTAAGGATTTCACCAGCTCTTTGTTATTGCGGAACAACGAGGCGTAGTCTTTATAAAACAGTGCGGCGACCAGCAAAATCAGTAGTACAGAAACCAGAATATTGGCTCCACGGAAAAGAACACTGCGCAGACGCGAGGTGGCAGGTTTGATTTTTATCCAGCAGGCAATCAGCG  >  NZ_CP009273/4324737‑4325001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: