| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,516,576 | A→G | Y44H (TAT→CAT) | sgcR ← | DeoR/GlpR family DNA‑binding transcription regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,516,576 | 0 | A | G | 96.3% | 293.6 / 1.3 | 82 | Y44H (TAT→CAT) | sgcR | DeoR/GlpR family DNA‑binding transcription regulator |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (40/39); total (42/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
CTATTTCTCTTTTCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCTCATCAGAAA > NZ_CP009273/4516447‑4516711 | cTATTTCTCTTTTCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAAt > 1:850237/1‑138 (MQ=255)cTATTTCTCTTTTCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAAt > 1:294317/1‑138 (MQ=255) tttCTCTTTTCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCacg < 1:1160773/139‑1 (MQ=255) tctcTTTTCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCacgac > 2:632312/1‑139 (MQ=255) tttCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGa > 2:318713/1‑137 (MQ=255) ttCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAg > 2:523460/1‑139 (MQ=255) cGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGt < 1:632312/138‑1 (MQ=255) cacaGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCt < 1:436194/139‑1 (MQ=255) tACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCaa > 1:941936/1‑138 (MQ=255) tACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCaa > 1:957739/1‑138 (MQ=255) ttCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCt > 2:755519/1‑139 (MQ=255) ttCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCt > 1:299433/1‑139 (MQ=255) aCGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTcc < 1:466922/138‑1 (MQ=255) aCGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTcc < 2:294317/138‑1 (MQ=255) aCGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCa > 2:309495/1‑139 (MQ=255) gTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATg < 2:177710/139‑1 (MQ=255) gAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGc < 2:299433/138‑1 (MQ=255) gAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGc < 2:900345/138‑1 (MQ=255) gAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGc < 1:318713/138‑1 (MQ=255) aaGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCct < 2:1200057/139‑1 (MQ=255) aGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGAGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctg < 2:1152431/139‑1 (MQ=255) aCGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGGCCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctgct < 2:883018/139‑1 (MQ=255) tACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCtgtg > 2:763053/1‑139 (MQ=255) ttGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGga > 2:493824/1‑137 (MQ=255) tagacgtcTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGgag < 2:299700/134‑1 (MQ=255) tGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGagag > 2:713545/1‑139 (MQ=255) cgtcTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGc < 2:698859/121‑1 (MQ=255) cgtcTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGc > 1:698859/1‑121 (MQ=255) cTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGAc > 2:396711/1‑138 (MQ=255) tACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATg < 2:941936/139‑1 (MQ=255) tACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATg > 2:856242/1‑139 (MQ=255) tGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTg > 1:1268557/1‑139 (MQ=255) tcgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctg < 2:383380/113‑1 (MQ=255) tcgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctg > 1:383380/1‑113 (MQ=255) tcgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGc > 2:31768/1‑138 (MQ=255) tcgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGc < 1:169657/138‑1 (MQ=255) tcgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGc > 1:132257/1‑138 (MQ=255) tcgtcgAACTCCAGGTAACCGTGACCGCGGACTACGTCTGGATAATGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCATCAGCATAGCAAAAAAGCTCCCTGGCCTGCTGTGCGGCGAGGCGACGAGGTTGc > 2:477439/1‑138 (MQ=255) gtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCca > 2:317923/1‑138 (MQ=255) ggcgAAGACCAGGCAACCGTGACCGCGGATCATGCCTGGATACGGGTTGACAATATGCTGGAAATCACGACGGGCAGTCGCTGCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGGGACGATGTTGcctc < 2:107284/137‑3 (MQ=255) tcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGcc > 2:1120491/1‑136 (MQ=255) tcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGcc < 1:1120491/136‑1 (MQ=255) gAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAgg > 2:413071/1‑139 (MQ=255) ccAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCct > 1:1272275/1‑102 (MQ=255) ccAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCct < 2:1272275/102‑1 (MQ=255) ccAGGCAACCGTGACCGCGGATAAAGCCTGGATACTGGTTGACAATATGCTGGAAAACACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTg < 1:348371/139‑1 (MQ=255) cAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTg < 1:234384/138‑1 (MQ=255) gCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTgcagc < 1:493824/139‑1 (MQ=255) aaCCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCAt < 2:850237/139‑1 (MQ=255) aaCCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCAt < 1:63565/139‑1 (MQ=255) cGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATg > 1:1186423/1‑115 (MQ=255) cGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATg < 2:1186423/115‑1 (MQ=255) tGACCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGtt > 1:904418/1‑139 (MQ=255) aCCGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGttt > 2:372450/1‑138 (MQ=255) ccGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATg > 2:94219/1‑110 (MQ=255) ccGCGGATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATg < 1:94219/110‑1 (MQ=255) ggATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGgag > 2:993633/1‑95 (MQ=255) ggATCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGgag < 1:993633/95‑1 (MQ=255) aTCATGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGt < 1:396711/139‑1 (MQ=255) tGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAgg < 1:642519/139‑1 (MQ=255) tGCCTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAgg < 1:232556/139‑1 (MQ=255) ccTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGt < 1:523460/138‑1 (MQ=255) ccTGGATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGt < 1:317923/138‑1 (MQ=255) gATACTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTg > 1:843080/1‑139 (MQ=255) cTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTgg < 1:413071/139‑1 (MQ=255) cTGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTgg < 1:755519/139‑1 (MQ=255) tGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGt < 2:804666/124‑1 (MQ=255) tGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGt > 1:804666/1‑124 (MQ=255) tGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGc > 1:1246045/1‑139 (MQ=255) tGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTACCGCATAGCCAAAAAGCTCCATGGCctg > 1:230340/1‑68 (MQ=255) tGGTTGACAATATGCTGGAAATCACGACGGACAGTCGCTACCGCATAGCCAAAAAGCTCCATGGCctg < 2:230340/68‑1 (MQ=255) ggTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCt > 2:1107601/1‑139 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGga < 2:10244/75‑1 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGga > 1:10244/1‑75 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGt < 1:291564/98‑1 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGt > 2:1186484/1‑98 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGt < 1:1186484/98‑1 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGt > 2:291564/1‑98 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCt > 2:577431/1‑138 (MQ=255) gTTGACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCt > 1:275491/1‑138 (MQ=255) gACAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCtcat > 1:950471/1‑138 (MQ=255) aCAATATGCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCtcat > 1:836849/1‑137 (MQ=255) tatgCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCTCATCAGaaa > 1:134101/1‑139 (MQ=255) tatgCTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCTCATCAGaaa > 1:766403/1‑139 (MQ=255) | CTATTTCTCTTTTCGCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACAGGTAGTGCAGCATCTGTTTGATACGGTCAGGTCTCTGTTGGCTCATCAGAAA > NZ_CP009273/4516447‑4516711 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |