| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,528,751 | T→C | T190A (ACG→GCG) | nanC ← | N‑acetylneuraminic acid outer membrane channel NanC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,528,751 | 0 | T | C | 90.6% | 281.5 / 17.0 | 97 | T190A (ACG→GCG) | nanC | N‑acetylneuraminic acid outer membrane channel NanC |
| Reads supporting (aligned to +/- strand): ref base T (6/3); new base C (45/42); total (52/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.99e-02 | |||||||||||
ACACACCAATGCGATAACTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCACGAGACA > NZ_CP009273/4528616‑4528885 | acacacCAATGCGATAACTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTccgccg < 2:63090/138‑1 (MQ=255) acacCAATGCGATAACTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCgccgcc > 1:375131/1‑138 (MQ=255) acacCAATGCGATAACTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGccc < 2:204590/139‑1 (MQ=255) tGCGATAACTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCCCCCATTTCtt < 1:286257/139‑1 (MQ=255) aCTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGttt > 1:810673/1‑139 (MQ=255) ttttCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGc < 1:504942/137‑1 (MQ=255) ttttCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCAt > 2:475658/1‑139 (MQ=255) tatctGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCt < 2:501009/137‑1 (MQ=255) tGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCt < 1:496323/135‑1 (MQ=255) tGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCt < 1:637347/135‑1 (MQ=255) ccGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTg < 2:1220264/138‑1 (MQ=255) ccGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTg < 1:1148341/138‑1 (MQ=255) cGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCt < 2:809241/139‑1 (MQ=255) ccTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGcgtcgt > 1:139877/1‑139 (MQ=255) ccTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGcgtcgt < 1:417964/139‑1 (MQ=255) aaGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGc > 1:463155/1‑138 (MQ=255) aaGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCg < 1:743806/139‑1 (MQ=255) aaGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCg < 1:704044/139‑1 (MQ=255) aGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCg > 1:634222/1‑138 (MQ=255) tAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAgg > 1:228846/1‑139 (MQ=255) gTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGt < 1:475658/138‑1 (MQ=255) tatTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAAt < 2:786135/139‑1 (MQ=255) ttCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCa > 2:126646/1‑139 (MQ=255) tCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCAc > 2:1109993/1‑139 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCAt < 2:50456/62‑1 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCAt > 1:50456/1‑62 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCa < 1:518247/77‑1 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCa > 2:518247/1‑77 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGcgtcgt > 2:151642/1‑112 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGcgtcgt < 1:151642/112‑1 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTAt > 2:340424/1‑138 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTAt > 2:711910/1‑138 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTAt > 2:4312/1‑138 (MQ=255) tgtatgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTAt > 2:87104/1‑138 (MQ=255) tgGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAata < 1:1054264/139‑1 (MQ=255) ggCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAatat > 2:1086831/1‑139 (MQ=255) gCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATg > 2:572390/1‑139 (MQ=255) gCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATg < 1:362734/139‑1 (MQ=255) cGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATgg > 2:587783/1‑139 (MQ=255) gTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt < 2:139877/139‑1 (MQ=255) gTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt < 1:1044472/139‑1 (MQ=255) tAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTa < 1:487027/139‑1 (MQ=255) aaTATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt > 2:1237852/1‑137 (MQ=255) aaTATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt > 1:458882/1‑137 (MQ=255) aaTATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt > 2:739980/1‑137 (MQ=255) aaTATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt > 2:1012991/1‑137 (MQ=255) aaTATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGATTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGt > 2:1057519/1‑137 (MQ=255) atatCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTaa < 1:1012991/138‑1 (MQ=255) atatCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTaa < 1:473838/138‑1 (MQ=255) tatCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCAc > 1:286817/1‑123 (MQ=255) tatCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCAc < 2:286817/123‑1 (MQ=255) tatCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGt > 2:884305/1‑139 (MQ=255) tCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGa < 1:663399/139‑1 (MQ=255) gggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGAc < 1:1237852/138‑1 (MQ=255) gggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGAc < 1:572390/138‑1 (MQ=255) gggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGAc < 2:164633/138‑1 (MQ=255) gggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGACGCCCATTTATTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAACTCACTATTAATTTGGTAAGTGACa > 2:228410/1‑139 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTg < 1:539396/81‑1 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTg > 2:539396/1‑81 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACa > 2:42079/1‑138 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGt < 2:837854/55‑1 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGt > 1:837854/1‑55 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAAt < 2:30104/115‑1 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAAt > 1:30104/1‑115 (MQ=255) ggCGTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACa > 2:208914/1‑138 (MQ=255) gTCATATGGTATTGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATatc < 2:634222/139‑1 (MQ=255) ttGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCa < 2:315155/46‑1 (MQ=255) ttGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCa > 1:315155/1‑46 (MQ=255) ttGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGa > 2:1098284/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 2:22382/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 2:47414/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 1:152827/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 1:481794/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 1:564535/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 2:80100/1‑139 (MQ=255) tGTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 2:837665/1‑139 (MQ=255) gTAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt < 1:80100/138‑1 (MQ=255) tAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCg > 1:577460/1‑55 (MQ=255) tAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCg < 2:577460/55‑1 (MQ=255) tAGAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATg > 1:1251939/1‑138 (MQ=255) gAACAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAAc < 2:564535/139‑1 (MQ=255) aaCAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt > 1:1094118/1‑134 (MQ=255) aaCAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGAt < 2:1094118/134‑1 (MQ=255) aCAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGt < 2:851703/139‑1 (MQ=255) cAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGt < 1:334759/56‑1 (MQ=255) cAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGt > 2:334759/1‑56 (MQ=255) cAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGt > 2:240011/1‑138 (MQ=255) cAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGt > 1:971867/1‑138 (MQ=255) cAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGt > 1:61893/1‑138 (MQ=255) cAAATGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCATCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGt > 1:834529/1‑138 (MQ=255) aaTGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTAt > 1:342903/1‑139 (MQ=255) aTGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTg > 2:424521/1‑56 (MQ=255) aTGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTg < 1:424521/56‑1 (MQ=255) aTGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATccc < 1:1239966/123‑1 (MQ=255) aTGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATccc > 2:1239966/1‑123 (MQ=255) tGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCa < 2:152827/139‑1 (MQ=255) tGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCa < 2:342903/139‑1 (MQ=255) tGCATTTTCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCa < 2:481794/139‑1 (MQ=255) tCCGCCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCACGAGACa > 1:906416/1‑139 (MQ=255) ccgccgCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCACGAGACa > 2:673090/1‑138 (MQ=255) | ACACACCAATGCGATAACTGTTTTCCGATAAATTATCTCTGCCGTTGTAAACACCCTGACGGTCAAGGTAGTCATATTCTATGTATGGCGTAATATCGGGCGTCATATGGTATTGTAGAACAAATGCATTTTCCGTCGCCCATTTCTTATGGTTTGCATAGCGATAATCGTTCTGTTTGCTGTATAGCGTCGTTTGCCATGCGAAGGTGAAATCACTATTAATATGGTAAGTGACATATCCATCCCAACGATGAACGTTATCACGAGACA > NZ_CP009273/4528616‑4528885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |