| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,119,962 | T→C | E274G (GAA→GGA) | mdtH ← | multidrug efflux MFS transporter MdtH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,119,962 | 0 | T | C | 98.7% | 289.6 / ‑3.9 | 77 | E274G (GAA→GGA) | mdtH | multidrug efflux MFS transporter MdtH |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (39/37); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
CACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTTCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTGGCAGCAT > NZ_CP009273/1119828‑1120095 | cACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCa < 2:436337/138‑1 (MQ=255) gATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTc > 1:1173233/1‑139 (MQ=255) gATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTc > 2:1239626/1‑139 (MQ=255) gACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAg < 2:381899/138‑1 (MQ=255) aCCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCg < 1:610997/139‑1 (MQ=255) aCCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCg < 1:908121/139‑1 (MQ=255) aCCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCg < 1:1217122/139‑1 (MQ=255) ccGATATAAAACAGACAAGTCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCggg < 2:1184990/139‑1 (MQ=255) gATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCAACCGGCATCATGCTTAATGCCATTATCAACAGCCAAGCCATAAACCGGTGTCCAAGACGAAATTGCTTTTACCTCAAGCGGGc > 2:729164/1‑138 (MQ=255) tataAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa > 1:661670/1‑138 (MQ=255) aaaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAggg < 2:664014/139‑1 (MQ=255) aaaCAGACAAAACAGGGGTAAAAGTTTTTGCAGGCCGCCTACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAggg < 1:729164/139‑1 (MQ=255) aGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTa > 1:122377/1‑137 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCt > 1:13347/1‑110 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCt < 2:1049383/110‑1 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCt < 2:13347/110‑1 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCt > 1:1049383/1‑110 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa < 2:1200237/128‑1 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa > 1:39023/1‑128 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa > 1:1200237/1‑128 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa < 2:39023/128‑1 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTagag > 2:1015771/1‑138 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTagag > 2:100594/1‑138 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTagag > 1:914766/1‑138 (MQ=255) cAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCa < 1:974411/139‑1 (MQ=255) gAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACga > 2:118922/1‑138 (MQ=255) aaaaGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgac < 1:1128359/138‑1 (MQ=255) aaGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacaga < 2:661670/139‑1 (MQ=255) gttgttGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca < 2:122377/139‑1 (MQ=255) gttgttGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca < 2:1179612/139‑1 (MQ=255) gttgttGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca < 1:1015771/139‑1 (MQ=255) gttgttGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTACCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca < 2:671714/139‑1 (MQ=255) tgttgCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACg > 2:121136/1‑139 (MQ=255) ttgCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGc < 2:391744/138‑1 (MQ=255) cGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGc < 1:770035/139‑1 (MQ=255) gCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCa < 2:690308/139‑1 (MQ=255) cTGACCATGCCCACCGGCATCATGCTTAATGATATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCa > 1:1129441/1‑138 (MQ=255) aTGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATc > 1:44154/1‑138 (MQ=255) gCCCACCGGCATCATGCTTAATTACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca > 1:1050079/1‑117 (MQ=255) gCCCACCGGCATCATGCTTAATTACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca < 2:1050079/117‑1 (MQ=255) gCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCAt > 2:228241/1‑139 (MQ=255) ccGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGc > 1:1285678/1‑78 (MQ=255) ccGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGc < 2:1285678/78‑1 (MQ=255) ccGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAAc > 2:61837/1‑139 (MQ=255) cGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACg > 2:392302/1‑139 (MQ=255) catcatGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCa < 2:1173233/139‑1 (MQ=255) tGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAggg > 2:1249556/1‑139 (MQ=255) aaTGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa < 1:777207/70‑1 (MQ=255) aaTGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGa > 2:777207/1‑70 (MQ=255) aaTGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGgcgcgc > 1:48084/1‑139 (MQ=255) aaTGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGgcgcgc > 2:49857/1‑139 (MQ=255) aTGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGgcgcgc > 1:593302/1‑138 (MQ=255) tGACATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGgcgcgc > 2:713250/1‑137 (MQ=255) cATTATCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCgccagcc < 1:153990/139‑1 (MQ=255) tCAACAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCAcgtc > 2:435678/1‑139 (MQ=255) aCAGCCCAGCCATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGtt < 1:435678/139‑1 (MQ=255) cagcccagccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca < 1:985894/84‑1 (MQ=255) cagcccagccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacagaca > 2:985894/1‑84 (MQ=255) gcccagccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGAc < 2:914766/139‑1 (MQ=255) cccagccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGgcg < 1:254192/119‑1 (MQ=255) cccagccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGgcg > 2:254192/1‑119 (MQ=255) cagccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCa > 1:617497/1‑138 (MQ=255) agccATCAACCGGTGTTCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCAt > 2:111114/1‑138 (MQ=255) ccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAAt > 1:977028/1‑139 (MQ=255) ccATCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAAt > 1:1242376/1‑139 (MQ=255) tCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTgg < 2:617497/139‑1 (MQ=255) tCAACCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTgg < 1:118922/139‑1 (MQ=255) aaCCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacaga > 2:1080268/1‑69 (MQ=255) aaCCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACgacaga < 1:1080268/69‑1 (MQ=255) aaCCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGa < 2:1143710/127‑1 (MQ=255) aaCCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGa > 1:1143710/1‑127 (MQ=255) aaCCGGTGTCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTGgc < 2:593302/138‑1 (MQ=255) gtgtCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCa > 1:451713/1‑87 (MQ=255) gtgtCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCa < 2:451713/87‑1 (MQ=255) gtgtCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTGGcagcat > 1:297024/1‑138 (MQ=255) gtgtCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTGGcagcat > 1:1211097/1‑138 (MQ=255) tgtCCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTACCGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTGGcagcat > 2:1003275/1‑137 (MQ=255) | CACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCCATCAACCGGTGTTCCAGACGAAAATGCTTTTCACTCCAGCGGGCGATAGGGTAGAGCAACGTTAACGACAGACACGCTTCAATGGCATACATCCATTTAACGGCAGAGGGCGCGCCAGCCACGTCGTTGACCATAATTGGCAGCAT > NZ_CP009273/1119828‑1120095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |