| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,121,190 | G→A | G58D (GGC→GAC) | rimJ → | ribosomal protein S5‑alanine N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,121,190 | 0 | G | A | 100.0% | 93.2 / NA | 25 | G58D (GGC→GAC) | rimJ | ribosomal protein S5‑alanine N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (13/12); total (13/12) | |||||||||||
CAGACCGACTGGTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGGCTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGATTATTGGCGTTGCCAATTT > NZ_CP009273/1121061‑1121298 | caGACCGACTGGTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGcaggc < 2:1036569/139‑1 (MQ=255) aCTGGTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTg > 1:780733/1‑139 (MQ=255) gTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTggg < 2:108765/137‑1 (MQ=255) gTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGaa < 1:1014991/138‑1 (MQ=255) tGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCa > 1:969662/1‑138 (MQ=255) tGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGcaggc > 2:784372/1‑105 (MQ=255) tGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGcaggc < 1:784372/105‑1 (MQ=255) tGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAAc > 1:518035/1‑137 (MQ=255) tGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAAc > 2:655104/1‑137 (MQ=255) ccTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt < 2:780733/138‑1 (MQ=255) ttGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTa > 1:389060/1‑139 (MQ=255) gATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGcaggc > 2:949757/1‑86 (MQ=255) gATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGcaggc < 1:949757/86‑1 (MQ=255) aTCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGa < 1:516249/139‑1 (MQ=255) tttCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGaaaaa < 1:1036783/139‑1 (MQ=255) ccTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAaga < 1:655104/138‑1 (MQ=255) cAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGat > 2:112225/1‑138 (MQ=255) tGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGATTATTGGCg > 2:1015048/1‑139 (MQ=255) tGCGCGACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGATTATTGGCGTTGCCAAttt > 2:352921/1‑139 (MQ=255) cgcgACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt < 1:543498/76‑1 (MQ=255) cgcgACGAAAGCCACTGTTATCCATCAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt > 2:543498/1‑76 (MQ=255) cAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt > 2:465153/1‑51 (MQ=255) cAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt < 2:537459/51‑1 (MQ=255) cAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt > 1:537459/1‑51 (MQ=255) cAGACTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGtt < 1:465153/51‑1 (MQ=255) | CAGACCGACTGGTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGGCTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGATTATTGGCGTTGCCAATTT > NZ_CP009273/1121061‑1121298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |