Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	3,858,886	T→C	T250A (ACC→GCC)	yidE ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	3,858,886	0	T	C	100.0%	292.0 / NA	74	T250A (ACC→GCC)	yidE	putative transporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/38);  total (36/38)

ACCACACGCTCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGTATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTTCTCAACGCGAATATTGA  >  NZ_CP009273/3858750‑3859014                                                                                                                                         |                                                                                                                                 accacACGCTCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCAt                                                                                                                                <  1:792866/139‑1 (MQ=255)     cacGCTCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTgg                                                                                                                            >  1:215231/1‑139 (MQ=255)     cacGCTCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTgg                                                                                                                            >  1:754327/1‑139 (MQ=255)     cacGCTCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTgg                                                                                                                            >  2:265053/1‑139 (MQ=255)          tCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAg                                                                                                                       >  2:428343/1‑139 (MQ=255)            gACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAgg                                                                                                                      <  1:265053/138‑1 (MQ=255)             aCGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGaa                                                                                                                    >  1:61565/1‑139 (MQ=255)                  cAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAgg                                                                                                                      <  1:599395/132‑1 (MQ=255)                  cAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAgg                                                                                                                      >  2:599395/1‑132 (MQ=255)                               ttCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcgc                                                                                                  >  2:768940/1‑139 (MQ=255)                               ttCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcgc                                                                                                  >  1:364972/1‑139 (MQ=255)                               ttCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcgc                                                                                                  >  2:264910/1‑139 (MQ=255)                                tCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   <  2:9835/137‑1 (MQ=255)                                tCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   <  2:604691/137‑1 (MQ=255)                                    ggACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACttt                                                                                                                >  1:835904/1‑120 (MQ=255)                                    ggACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACttt                                                                                                                <  2:835904/120‑1 (MQ=255)                                          cGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGAcgc                                                                                       >  2:3653/1‑139 (MQ=255)                                          cGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGAcgc                                                                                       >  1:144720/1‑139 (MQ=255)                                                         ctGACCTATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   >  2:514608/1‑112 (MQ=255)                                                         ctGACCTATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   <  1:514608/112‑1 (MQ=255)                                                            aCCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGt                                                                       <  2:389475/137‑1 (MQ=255)                                                                aTCACCAGTTGCGCATTATGTAAATCCGCTGGCTGTCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTttctt                                                                                                     <  2:406895/103‑1 (MQ=255)                                                                aTCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTttctt                                                                                                     >  1:406895/1‑103 (MQ=255)                                                                   aCCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGtt                                                                >  1:704179/1‑137 (MQ=255)                                                                     cAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTgaga                                                            <  1:37741/139‑1 (MQ=255)                                                                       gTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAAt                                                          <  1:831823/139‑1 (MQ=255)                                                                        ttGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTg                                                               <  2:299529/133‑1 (MQ=255)                                                                        ttGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTg                                                               >  1:299529/1‑133 (MQ=255)                                                                           cgcATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGt                                                                 <  2:355452/128‑1 (MQ=255)                                                                           cgcATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGt                                                                 >  1:355452/1‑128 (MQ=255)                                                                           cgcATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCgg                                                       >  2:743971/1‑138 (MQ=255)                                                                                tATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATc                                                 >  1:340643/1‑139 (MQ=255)                                                                                    tAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTa                                             <  2:215231/139‑1 (MQ=255)                                                                                        tCCGCTGGCTGACCCACCAGATGCAGCAAAGCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATgg                                         <  2:250898/139‑1 (MQ=255)                                                                                          cGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCt                                       <  2:144720/139‑1 (MQ=255)                                                                                          cGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCt                                       <  2:61565/139‑1 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   >  2:529261/1‑77 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   <  1:529261/77‑1 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATc                                                         >  2:110151/1‑119 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATc                                                         <  1:110151/119‑1 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCgg                                                       >  1:86214/1‑121 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCgg                                                       <  2:86214/121‑1 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTa                                      >  1:227970/1‑138 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTa                                      >  1:311203/1‑138 (MQ=255)                                                                                            ctggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTa                                      >  2:754855/1‑138 (MQ=255)                                                                                              ggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTa                                                     >  2:247817/1‑121 (MQ=255)                                                                                              ggctgACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTa                                                     <  1:247817/121‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCAt                                <  1:27437/137‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  2:704179/138‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  1:733267/138‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  2:340643/138‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  1:3653/138‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  2:364972/138‑1 (MQ=255)                                                                                                   aCCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  1:490571/138‑1 (MQ=255)                                                                                                    cccACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTaaa                                    >  1:423577/1‑132 (MQ=255)                                                                                                    cccACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTaaa                                    <  2:423577/132‑1 (MQ=255)                                                                                                    cccACCAGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               >  2:521458/1‑137 (MQ=255)                                                                                                      caccaGATGCAGCAAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAgg                           <  1:428343/139‑1 (MQ=255)                                                                                                               cagcaAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTtc                  >  1:704863/1‑139 (MQ=255)                                                                                                                  caAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   >  2:152864/1‑55 (MQ=255)                                                                                                                  caAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   <  1:152864/55‑1 (MQ=255)                                                                                                                  caAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   <  2:734069/55‑1 (MQ=255)                                                                                                                  caAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTcg                                                                                                   >  1:734069/1‑55 (MQ=255)                                                                                                                  caAATCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTtctc                >  2:281500/1‑138 (MQ=255)                                                                                                                     aTCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTTCTCAAcg            <  2:754327/139‑1 (MQ=255)                                                                                                                      tCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCg                                                                     <  2:188814/81‑1 (MQ=255)                                                                                                                      tCGCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCg                                                                     >  1:188814/1‑81 (MQ=255)                                                                                                                        gCCCAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTTCTCAAcgcg          <  2:704863/138‑1 (MQ=255)                                                                                                                          ccAGTTGGATAATGGCATCTTGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCttt                                              >  2:486462/1‑100 (MQ=255)                                                                                                                          ccAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCttt                                              <  1:486462/100‑1 (MQ=255)                                                                                                                          ccAGTTGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTTCTCAACGCGaa        >  1:363340/1‑138 (MQ=255)                                                                                                                              ttGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               <  2:82243/111‑1 (MQ=255)                                                                                                                              ttGGATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATg                               >  1:82243/1‑111 (MQ=255)                                                                                                                                ggATAATGGCATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTTCTCAACGCGAATATTGa  <  1:172032/138‑1 (MQ=255)                                                                                                                                         |                                                                                                                                 ACCACACGCTCGACGCGCAAATCAGTGCCTTTCGTGGACAGCGAAGTATCGACCTCCTGACCAATCACCAGTTGCGCATTATGTAAATCCGCTGGCTGACCCACCAGATGCAGCAAATCGCCCAGTTGGATAATGGTATCTGGCGAAGGAACTTTTAGGGTTTCTTCGCGTTTCAGACGCGAGCAGATAATTTTGTCGCCGTTGAGAATCGGTACATCTTTAATGGCTAAATCATGCAGGTTAGGGTTCTCAACGCGAATATTGA  >  NZ_CP009273/3858750‑3859014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑