| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 232,843 | T→A | I97N (ATC→AAC) | dnaQ → | DNA polymerase III subunit epsilon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 232,843 | 0 | T | A | 100.0% | 95.4 / NA | 25 | I97N (ATC→AAC) | dnaQ | DNA polymerase III subunit epsilon |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (13/12); total (13/12) | |||||||||||
CCCGATCGGCTGGTGGATCCGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGATCCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGATAGCCTTGCGGTGGCGAGGAAAATG > NZ_CP009273/232713‑232964 | cccGATCGGCTGGTGGATCCGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACg < 1:788489/139‑1 (MQ=255) cGATCGGCTGGTGGATCCGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCa < 2:66326/139‑1 (MQ=255) cGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCtt > 2:162466/1‑139 (MQ=255) ccTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATgg > 2:128566/1‑138 (MQ=255) cATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGtttt > 1:793421/1‑139 (MQ=255) gAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAgcgc > 1:231500/1‑138 (MQ=255) cTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCg < 2:397366/138‑1 (MQ=255) cTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCg < 2:152440/138‑1 (MQ=255) cACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACt < 1:297145/139‑1 (MQ=255) gTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTc > 1:743681/1‑139 (MQ=255) gCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAgcg > 1:707721/1‑110 (MQ=255) gCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAgcg < 2:707721/110‑1 (MQ=255) cGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGAt < 2:231500/139‑1 (MQ=255) cTATATTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGATAGCCTTGCGGTGGc > 1:598352/1‑138 (MQ=255) atatTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTa < 1:497427/54‑1 (MQ=255) atatTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTa > 2:497427/1‑54 (MQ=255) atatTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACt > 2:809351/1‑104 (MQ=255) atatTCGCGGCGCGGAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACt < 1:809351/104‑1 (MQ=255) gcggcgcggAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTa < 2:385084/105‑1 (MQ=255) gcggcgcggAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTa > 1:385084/1‑105 (MQ=255) cggcgcggAGTTGGTGAACCATAACGCAGCGTTCGatat < 2:524258/39‑1 (MQ=255) cggcgcggAGTTGGTGAACCATAACGCAGCGTTCGatat > 1:524258/1‑39 (MQ=255) cggcgcggAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGATAGCCTTGCGGTGGCGAGGAAAATg > 2:133295/1‑139 (MQ=255) gcgcggAGTTGGTGAACCATAACGCCGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTaa > 2:110836/1‑70 (MQ=255) gcgcggAGTTGGTGAACCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTaa < 1:110836/70‑1 (MQ=255) | CCCGATCGGCTGGTGGATCCGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGATCCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGATAGCCTTGCGGTGGCGAGGAAAATG > NZ_CP009273/232713‑232964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |