| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,395,746 | C→T | L95L (CTG→CTA) | abgT ← | p‑aminobenzoyl‑glutamate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,395,746 | 0 | C | T | 100.0% | 47.4 / NA | 13 | L95L (CTG→CTA) | abgT | p‑aminobenzoyl‑glutamate transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/7); total (6/7) | |||||||||||
GCTGAAAAAAGCAATAAACAGCACCATATAACTGGCGTAGCGGGCATTAACATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCCAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACTGAGCAGGTTTTTCACCACGACCGGCGTACCATCGGTCGGGTTTTTCGCACTG > NZ_CP009273/1395620‑1395875 | gCTGAAAAAAGCAATAAACAGCACCATATAACTGGCGTAGCGGGCATTAACATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCAcc > 2:51610/1‑138 (MQ=255) aaaaaaGCAATAAACAGCACCATATAACTGGCGTAGCGGGCATTAACATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAg < 2:426594/137‑1 (MQ=255) cACCATATAACTGGCGTAGCGGGCATTAACATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAg > 1:273020/1‑139 (MQ=255) cACCATATAACTGGCGTAGCGGGCATTAACATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAg > 2:367297/1‑139 (MQ=255) cATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAgtg < 1:367297/139‑1 (MQ=255) cGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTaa < 2:273020/138‑1 (MQ=255) aTTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATc > 1:220340/1‑72 (MQ=255) aTTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATc < 2:220340/72‑1 (MQ=255) aCCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACt > 2:552057/1‑137 (MQ=255) aGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACTGAGCAGGTTTTTCACCACGAc < 1:771229/139‑1 (MQ=255) aGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACTGAGCAGGTTTTTCACCACGAc < 2:299768/139‑1 (MQ=255) cgcTCCGCCAGACCGGCACCTAAAACCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACTGAGCAGGTTTTTCACCACGACCGGCGTAc > 2:351505/1‑139 (MQ=255) aaCCAGCGCTAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACTGAGCAGGTTTTTCACCACGACCGGCGTACCATCGGTCGGGTTTTTCGCACTg < 1:358850/139‑1 (MQ=255) | GCTGAAAAAAGCAATAAACAGCACCATATAACTGGCGTAGCGGGCATTAACATGCGATGCCATTTTAACCATTAGTGCTGGCAGTAAGCCGACGCGCTCCGCCAGACCGGCACCTAAAACCAGCGCCAGGATCGCACCAAGTGGAGCAAAACCGCTAAAGTTTTTAATAACATTGGGTAAAAACCAGTGTAATCCTTCCACACTGAGCAGGTTTTTCACCACGACCGGCGTACCATCGGTCGGGTTTTTCGCACTG > NZ_CP009273/1395620‑1395875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |