| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,897,407 | A→C | intergenic (+674/+699) | ygcE → / ← queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,897,407 | 0 | A | C | 100.0% | 143.8 / NA | 40 | intergenic (+674/+699) | ygcE/queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (22/18); total (22/18) | |||||||||||
ATGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACA > NZ_CP009273/2897273‑2897538 | aTGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGc < 2:442078/139‑1 (MQ=255) tGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGcc > 2:717535/1‑139 (MQ=255) gagaACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCt < 2:539937/138‑1 (MQ=255) gagaACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCt > 2:374697/1‑138 (MQ=255) aaCATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCa < 2:161426/139‑1 (MQ=255) gAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTc > 1:448306/1‑139 (MQ=255) ggTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGCCAGGCTCCg > 2:18455/1‑139 (MQ=255) cAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAacac < 2:559562/139‑1 (MQ=255) gCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTc > 1:607089/1‑139 (MQ=255) atatAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa > 2:477599/1‑138 (MQ=255) aaCTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATg < 2:62395/139‑1 (MQ=255) tGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATg > 2:486792/1‑135 (MQ=255) tGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATg < 1:486792/135‑1 (MQ=255) agaAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTAt < 1:374697/139‑1 (MQ=255) aaaGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTg < 2:607089/139‑1 (MQ=255) gaTAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTAtt < 1:477599/139‑1 (MQ=255) ttATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCg < 1:705416/107‑1 (MQ=255) ttATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCg > 2:705416/1‑107 (MQ=255) tggtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTgg > 1:367706/1‑139 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGcgcg < 2:270403/80‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGcgcg > 1:270403/1‑80 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAacac > 2:239971/1‑88 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAacac < 1:239971/88‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa > 2:125229/1‑99 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCa < 1:125229/99‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCgg > 2:83806/1‑123 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCgg < 1:83806/123‑1 (MQ=255) gtTTATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGgcg > 1:514798/1‑139 (MQ=255) tttATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGgcgc > 1:229624/1‑139 (MQ=255) tATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGcgcg < 2:229624/138‑1 (MQ=255) tATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCgg > 2:471227/1‑139 (MQ=255) tATCCCCGCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCgg > 1:107727/1‑139 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTAtt < 1:737789/110‑1 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTAtt > 2:737789/1‑110 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGTCGCGGGGAacac > 2:797114/1‑139 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAacac > 2:139935/1‑139 (MQ=255) gCTGGCGCGGGGAACTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAacac > 1:37843/1‑139 (MQ=255) cTCGACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATa > 2:619147/1‑139 (MQ=255) gACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACa < 2:367706/138‑1 (MQ=255) gACAGACCGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACa < 2:707228/138‑1 (MQ=255) | ATGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAAAACTTGAGAAAGAGATAACGGGTTATATGGTGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACA > NZ_CP009273/2897273‑2897538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |