| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 183,409 | A→G | F577L (TTT→CTT) | glnD ← | bifunctional uridylyltransferase/uridylyl‑removing protein GlnD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 183,409 | 0 | A | G | 100.0% | 151.8 / NA | 43 | F577L (TTT→CTT) | glnD | bifunctional uridylyltransferase/uridylyl‑removing protein GlnD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (21/22); total (21/22) | |||||||||||
GCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAACTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCAAAATGCACTAC > NZ_CP009273/183279‑183544 | gCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTtga < 1:832817/139‑1 (MQ=255) gagCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTcc < 1:119553/139‑1 (MQ=255) gagCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTcc < 2:281162/139‑1 (MQ=255) gagCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTcc < 1:549118/139‑1 (MQ=255) gCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCt > 2:501083/1‑138 (MQ=255) aCTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATcg < 1:501083/139‑1 (MQ=255) ccTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCATGCATACCAGTTAGCGCACACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGTGTCCTGAATATCGCGGCGTTGGGCg > 2:756549/2‑139 (MQ=255) ttCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCa < 2:385900/139‑1 (MQ=255) aGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACa > 2:369754/1‑139 (MQ=255) tttCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCaa > 2:423350/1‑139 (MQ=255) tttCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCaa > 2:43900/1‑139 (MQ=255) tCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAAc < 1:43900/138‑1 (MQ=255) gtggtgCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCt > 2:352064/1‑139 (MQ=255) ggCACAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCa < 2:561546/119‑1 (MQ=255) ggCACAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCa > 1:561546/1‑119 (MQ=255) gcgcAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATcg < 1:502164/102‑1 (MQ=255) gcgcAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATcg > 2:502164/1‑102 (MQ=255) caGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGAc < 1:423350/139‑1 (MQ=255) tCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAg > 1:418557/1‑139 (MQ=255) aCCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTtgat < 2:145869/53‑1 (MQ=255) aCCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTtgat > 1:145869/1‑53 (MQ=255) aCCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGttt > 1:264208/1‑139 (MQ=255) gATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTcgcg < 1:752500/139‑1 (MQ=255) gATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTcgcg < 2:735719/139‑1 (MQ=255) aTAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGAc < 2:112758/123‑1 (MQ=255) aTAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGAc > 1:112758/1‑123 (MQ=255) tAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGt > 2:851085/1‑138 (MQ=255) cgcAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCg < 2:279118/85‑1 (MQ=255) cgcAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCg > 1:279118/1‑85 (MQ=255) cgcAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGt > 1:594766/1‑139 (MQ=255) cgcAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGt > 1:380064/1‑139 (MQ=255) cgcAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGt > 1:330011/1‑139 (MQ=255) cAGACGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGtt > 2:29078/1‑138 (MQ=255) aCGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCa > 1:698141/1‑77 (MQ=255) aCGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCa < 2:698141/77‑1 (MQ=255) aCGATTTTCCGTTTGCACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGc > 1:678302/1‑139 (MQ=255) cACTTCTTCGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCa < 2:678302/139‑1 (MQ=255) cttcGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCAAAAt < 2:292455/138‑1 (MQ=255) cttcGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCAAAAt < 1:352064/138‑1 (MQ=255) cttcGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCAAAAt < 1:29078/138‑1 (MQ=255) cGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGaa < 1:544579/78‑1 (MQ=255) cGGCAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGaa > 2:544579/1‑78 (MQ=255) cAAGCTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCAAAATGCACTAc < 1:843767/139‑1 (MQ=255) | GCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTGGCGCAAATGTCAGCCACAGTCAGGCATACCAGATAGCGCAGACGATTTTCCGTTTGCACTTCTTCGGCAAACTGCTTGATGACTTCCGGGTCCTGAATATCGCGGCGTTGGGCGGTCACCGACATCAACAGGTGCTGGCGAACCAGCCAGGCGACCAGCTGTGTTTCGCGTGAGTTCAGCCCGTGGAGTTCGGCAAAATGCACTAC > NZ_CP009273/183279‑183544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |