| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,322,128 | (C)5→4 | coding (1149/1650 nt) | yfaQ ← | YfaQ family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,322,124 | 0 | C | . | 100.0% | 82.8 / NA | 20 | coding (1153/1650 nt) | yfaQ | YfaQ family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (10/10); total (10/10) | |||||||||||
TCTCCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCGCCCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGCTTT > NZ_CP009273/2321997‑2322247 | tctcCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGc > 2:34487/1‑139 (MQ=255) tcCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTg > 2:371343/1‑139 (MQ=255) ccTTCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGc < 1:128645/139‑1 (MQ=255) tGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGc > 2:437080/1‑139 (MQ=255) tGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGc > 2:297322/1‑139 (MQ=255) tGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGc > 2:190813/1‑139 (MQ=255) ggCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCg > 1:94917/1‑139 (MQ=255) gccAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCgctg < 1:371343/139‑1 (MQ=255) cAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCgctgct < 1:487982/139‑1 (MQ=255) tgtCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGa < 1:437080/139‑1 (MQ=255) ccTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGt < 2:63887/139‑1 (MQ=255) gTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCa < 1:34487/139‑1 (MQ=255) cgACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCgct < 2:313139/112‑1 (MQ=255) cgACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCgct > 1:313139/1‑112 (MQ=255) aCCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTg < 2:301431/139‑1 (MQ=255) gATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGGCATCGTTCGCG‑CCCCGTGGGCGCTGGCGAAGCAGAAACACGATGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCACGATTGGCGTTTTGATg > 2:179540/1‑138 (MQ=255) aTCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCg < 2:289262/64‑1 (MQ=255) aTCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCg > 1:289262/1‑64 (MQ=255) gCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGCttt < 1:297322/139‑1 (MQ=255) gCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGGCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTAATGGCttt > 2:319037/1‑139 (MQ=255) | TCTCCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCGCCCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGCTTT > NZ_CP009273/2321997‑2322247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |