| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 384,326 | A→C | G286G (GGT→GGG) | hemB ← | porphobilinogen synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 384,326 | 0 | A | C | 100.0% | 66.4 / NA | 19 | G286G (GGT→GGG) | hemB | porphobilinogen synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (6/13); total (6/13) | |||||||||||
ACAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCACCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAGG > NZ_CP009273/384203‑384455 | aCAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCgcggcg < 2:488261/139‑1 (MQ=255) ttAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTa < 1:492891/139‑1 (MQ=255) aaTCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCa < 2:239843/139‑1 (MQ=255) ctcAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCa < 1:198352/136‑1 (MQ=255) cAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCt < 2:242240/139‑1 (MQ=255) aGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg < 2:83494/136‑1 (MQ=255) ccAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCAc > 2:476855/1‑139 (MQ=255) aGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATAcg < 2:110758/139‑1 (MQ=255) cacccgcacGCTTAATCGAACCTAAGCTTTCAAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg > 1:360539/1‑98 (MQ=255) cacccgcacGCTTAATCGAACCTAAGCTTTCAAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg < 2:360539/98‑1 (MQ=255) acccgcacGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGc < 1:25502/139‑1 (MQ=255) gcacGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCt > 1:277339/1‑139 (MQ=255) aCCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTc > 1:179726/1‑138 (MQ=255) cTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTc < 1:60854/106‑1 (MQ=255) cTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTc > 2:60854/1‑106 (MQ=255) tCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACg < 1:395558/110‑1 (MQ=255) tCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACg > 2:395558/1‑110 (MQ=255) aTCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAgg < 2:372785/139‑1 (MQ=255) aTCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAgg < 2:486521/139‑1 (MQ=255) | ACAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCACCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAGG > NZ_CP009273/384203‑384455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |