| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,624,590 | T→C | D194G (GAC→GGC) | ydfI ← | mannitol dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,624,590 | 0 | T | C | 100.0% | 85.6 / NA | 25 | D194G (GAC→GGC) | ydfI | mannitol dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (12/13); total (12/13) | |||||||||||
TTCGATTTTCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGT > NZ_CP009273/1624457‑1624713 | ttCGATTTTCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg > 1:137260/1‑138 (MQ=255) ttCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACAt > 2:447364/1‑139 (MQ=255) gTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAtgt > 2:368320/1‑139 (MQ=255) tCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAtgtt < 1:447364/139‑1 (MQ=255) tCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAtgtt < 2:353457/139‑1 (MQ=255) tCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAt < 2:137260/136‑1 (MQ=255) cGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTca < 1:38176/137‑1 (MQ=255) cGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTca < 2:423654/137‑1 (MQ=255) caTTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCg > 1:29507/1‑139 (MQ=255) ttgATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCacatgacat > 1:363506/1‑121 (MQ=255) ttgATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCacatgacat < 2:363506/121‑1 (MQ=255) ttgATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAg > 2:22390/1‑139 (MQ=255) gATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTc > 1:36950/1‑139 (MQ=255) ggAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTg < 1:248326/138‑1 (MQ=255) aTTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCt > 1:37045/1‑138 (MQ=255) tgtgCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTcc < 1:231656/110‑1 (MQ=255) tgtgCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTcc > 2:231656/1‑110 (MQ=255) gtgCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTa < 1:468846/95‑1 (MQ=255) gtgCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTa > 2:468846/1‑95 (MQ=255) gTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCAc < 2:37045/139‑1 (MQ=255) gTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCAc > 2:420708/1‑139 (MQ=255) tgCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCgg < 2:29507/138‑1 (MQ=255) tAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCtggt < 1:420708/139‑1 (MQ=255) gTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCggg > 2:408403/1‑68 (MQ=255) gTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCggg < 1:408403/68‑1 (MQ=255) | TTCGATTTTCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGT > NZ_CP009273/1624457‑1624713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |